Variables Don't Remap Once a Theme is Enabled in another Theme-group

[keeganedwin]

Describe the bug
I export variables with a base and mode theme-groups. If I then want to change the location of the light theme from mode to the base theme-group, I enable the light theme in base and disable it in mode/light. I then delete the mode collection from Figma and re-export the base theme-group with the light theme. I click apply to selection and the plugin remaps the variable. However, with a little more complicated setup, multiple theme-groups and themes selected seems to affect this and so does not remap the variable(s) correctly.

To Reproduce
Steps to reproduce the behavior:
Provided in the test file

Expected behavior
In this case, the tokens haven't changed. So regardless of which theme-group the theme is enabled, the plugin should just be able to remap it.

Screenshots or Screencasts
This recording shows a simple and working example
https://github.com/user-attachments/assets/3926a9b1-da59-4470-a71a-67a113269d4

Figma file (optional)
Test file