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environment.yml
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name: nanopore
channels:
- conda-forge
- defaults
dependencies:
- abseil-cpp=20211102.0=he9d5cce_0
- anyio=3.5.0=py311hecd8cb5_0
- appdirs=1.4.4=pyhd3eb1b0_0
- appnope=0.1.2=py311hecd8cb5_1001
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py311h6c40b1e_0
- arrow-cpp=11.0.0=py311hb8cef1d_0
- asttokens=2.0.5=pyhd3eb1b0_0
- attrs=22.1.0=py311hecd8cb5_0
- aws-c-common=0.4.57=hb1e8313_1
- aws-c-event-stream=0.1.6=h23ab428_5
- aws-checksums=0.1.9=hb1e8313_0
- aws-sdk-cpp=1.8.185=he271ece_0
- babel=2.11.0=py311hecd8cb5_0
- backcall=0.2.0=pyhd3eb1b0_0
- beautifulsoup4=4.12.2=py311hecd8cb5_0
- blas=1.0=mkl
- bleach=4.1.0=pyhd3eb1b0_0
- bokeh=3.1.1=py311h85bffb1_0
- boost-cpp=1.73.0=hca72f7f_12
- bottleneck=1.3.5=py311hb9e55a9_0
- brotli=1.0.9=hca72f7f_7
- brotli-bin=1.0.9=hca72f7f_7
- brotlipy=0.7.0=py311h6c40b1e_1002
- bzip2=1.0.8=h1de35cc_0
- c-ares=1.19.0=h6c40b1e_0
- ca-certificates=2023.05.30=hecd8cb5_0
- certifi=2023.5.7=py311hecd8cb5_0
- cffi=1.15.1=py311h6c40b1e_3
- charset-normalizer=2.0.4=pyhd3eb1b0_0
- click=8.0.4=py311hecd8cb5_0
- cloudpickle=2.2.1=py311hecd8cb5_0
- comm=0.1.2=py311hecd8cb5_0
- contourpy=1.0.5=py311ha357a0b_0
- cryptography=39.0.1=py311hf6deb26_0
- cycler=0.11.0=pyhd3eb1b0_0
- cytoolz=0.12.0=py311h6c40b1e_0
- dask=2023.6.0=py311hecd8cb5_0
- dask-core=2023.6.0=py311hecd8cb5_0
- debugpy=1.5.1=py311hcec6c5f_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- distributed=2023.6.0=py311hecd8cb5_0
- entrypoints=0.4=py311hecd8cb5_0
- executing=0.8.3=pyhd3eb1b0_0
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.12.1=hd8bbffd_0
- fsspec=2023.4.0=py311hecd8cb5_0
- gflags=2.2.2=h0a44026_0
- giflib=5.2.1=h6c40b1e_3
- glog=0.5.0=h23ab428_0
- grpc-cpp=1.46.1=h64d96ca_1
- h5py=3.7.0=py311h4bbaca6_0
- hdf5=1.10.6=h10fe05b_1
- heapdict=1.0.1=pyhd3eb1b0_0
- icu=58.2=h0a44026_3
- idna=3.4=py311hecd8cb5_0
- importlib-metadata=6.0.0=py311hecd8cb5_0
- intel-openmp=2023.1.0=ha357a0b_43547
- ipykernel=6.19.2=py311h4975b63_0
- ipython=8.12.0=py311hecd8cb5_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- ipywidgets=8.0.4=py311hecd8cb5_0
- jedi=0.18.1=py311hecd8cb5_1
- jinja2=3.1.2=py311hecd8cb5_0
- jpeg=9e=h6c40b1e_1
- json5=0.9.6=pyhd3eb1b0_0
- jsonschema=4.17.3=py311hecd8cb5_0
- jupyter_client=8.1.0=py311hecd8cb5_0
- jupyter_core=5.3.0=py311hecd8cb5_0
- jupyter_events=0.6.3=py311hecd8cb5_0
- jupyter_server=2.5.0=py311hecd8cb5_0
- jupyter_server_terminals=0.4.4=py311hecd8cb5_0
- jupyterlab=3.5.3=py311hecd8cb5_0
- jupyterlab_pygments=0.1.2=py_0
- jupyterlab_server=2.22.0=py311hecd8cb5_0
- jupyterlab_widgets=3.0.5=py311hecd8cb5_0
- kiwisolver=1.4.4=py311hcec6c5f_0
- krb5=1.20.1=hdba6334_1
- lcms2=2.12=hf1fd2bf_0
- lerc=3.0=he9d5cce_0
- libboost=1.73.0=h3fa6bed_12
- libbrotlicommon=1.0.9=hca72f7f_7
- libbrotlidec=1.0.9=hca72f7f_7
- libbrotlienc=1.0.9=hca72f7f_7
- libcurl=8.1.1=ha585b31_1
- libcxx=14.0.6=h9765a3e_0
- libdeflate=1.17=hb664fd8_0
- libedit=3.1.20221030=h6c40b1e_0
- libev=4.33=h9ed2024_1
- libevent=2.1.12=h0a4fc7d_0
- libffi=3.4.4=hecd8cb5_0
- libgfortran=5.0.0=11_3_0_hecd8cb5_28
- libgfortran5=11.3.0=h9dfd629_28
- libiconv=1.16=hca72f7f_2
- libnghttp2=1.52.0=h1c88b7d_1
- libpng=1.6.39=h6c40b1e_0
- libprotobuf=3.20.3=hfff2838_0
- libsodium=1.0.18=h1de35cc_0
- libssh2=1.10.0=hdb2fb19_2
- libthrift=0.15.0=h48f73ad_2
- libtiff=4.5.0=hcec6c5f_2
- libuv=1.44.2=h6c40b1e_0
- libwebp=1.2.4=hf6ce154_1
- libwebp-base=1.2.4=h6c40b1e_1
- libxml2=2.10.3=h930c0e2_0
- libxslt=1.1.37=h6d1eb0e_0
- llvm-openmp=14.0.6=h0dcd299_0
- locket=1.0.0=py311hecd8cb5_0
- lxml=4.9.2=py311h6c40b1e_0
- lz4=4.3.2=py311h6c40b1e_0
- lz4-c=1.9.4=hcec6c5f_0
- markupsafe=2.1.1=py311h6c40b1e_0
- matplotlib=3.7.1=py311hecd8cb5_1
- matplotlib-base=3.7.1=py311h11e8b89_1
- matplotlib-inline=0.1.6=py311hecd8cb5_0
- mistune=0.8.4=py311h6c40b1e_1000
- mkl=2023.1.0=h59209a4_43558
- mkl-service=2.4.0=py311h6c40b1e_1
- mkl_fft=1.3.6=py311hdb55bb0_1
- mkl_random=1.2.2=py311hdb55bb0_1
- msgpack-python=1.0.3=py311ha357a0b_0
- munkres=1.1.4=py_0
- nbclassic=0.5.5=py311hecd8cb5_0
- nbclient=0.5.13=py311hecd8cb5_0
- nbconvert=6.5.4=py311hecd8cb5_0
- nbformat=5.7.0=py311hecd8cb5_0
- ncurses=6.4=hcec6c5f_0
- nest-asyncio=1.5.6=py311hecd8cb5_0
- nodejs=18.15.0=hab5cffc_0
- notebook=6.5.4=py311hecd8cb5_0
- notebook-shim=0.2.2=py311hecd8cb5_0
- numexpr=2.8.4=py311h728a8a3_1
- numpy=1.24.3=py311h728a8a3_1
- numpy-base=1.24.3=py311h53bf9ac_1
- openssl=1.1.1u=hca72f7f_0
- orc=1.7.4=h995b336_1
- packaging=23.0=py311hecd8cb5_0
- pandas=1.5.3=py311hc5848a5_0
- pandocfilters=1.5.0=pyhd3eb1b0_0
- parso=0.8.3=pyhd3eb1b0_0
- partd=1.2.0=pyhd3eb1b0_1
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=9.4.0=py311hcec6c5f_0
- pip=23.0.1=py311hecd8cb5_0
- platformdirs=2.5.2=py311hecd8cb5_0
- plotly=5.14.1=pyhd8ed1ab_0
- pooch=1.4.0=pyhd3eb1b0_0
- prometheus_client=0.14.1=py311hecd8cb5_0
- prompt-toolkit=3.0.36=py311hecd8cb5_0
- psutil=5.9.0=py311h6c40b1e_0
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pure_eval=0.2.2=pyhd3eb1b0_0
- pyarrow=11.0.0=py311hf41f4e6_0
- pycparser=2.21=pyhd3eb1b0_0
- pygments=2.15.1=py311hecd8cb5_1
- pyopenssl=23.0.0=py311hecd8cb5_0
- pyparsing=3.0.9=py311hecd8cb5_0
- pyrsistent=0.18.0=py311h6c40b1e_0
- pysocks=1.7.1=py311hecd8cb5_0
- python=3.11.3=h1fd4e5f_0
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-fastjsonschema=2.16.2=py311hecd8cb5_0
- python-json-logger=2.0.7=py311hecd8cb5_0
- python-lmdb=1.4.1=py311hcec6c5f_0
- pytz=2022.7=py311hecd8cb5_0
- pyyaml=6.0=py311h6c40b1e_1
- pyzmq=25.0.2=py311hcec6c5f_0
- re2=2022.04.01=he9d5cce_0
- readline=8.2=hca72f7f_0
- requests=2.29.0=py311hecd8cb5_0
- rfc3339-validator=0.1.4=py311hecd8cb5_0
- rfc3986-validator=0.1.1=py311hecd8cb5_0
- scipy=1.10.1=py311h224febf_1
- seaborn=0.12.2=py311hecd8cb5_0
- send2trash=1.8.0=pyhd3eb1b0_1
- setuptools=67.8.0=py311hecd8cb5_0
- six=1.16.0=pyhd3eb1b0_1
- snappy=1.1.9=he9d5cce_0
- sniffio=1.2.0=py311hecd8cb5_1
- sortedcontainers=2.4.0=pyhd3eb1b0_0
- soupsieve=2.4=py311hecd8cb5_0
- sqlite=3.41.2=h6c40b1e_0
- stack_data=0.2.0=pyhd3eb1b0_0
- tbb=2021.8.0=ha357a0b_0
- tblib=1.7.0=pyhd3eb1b0_0
- tenacity=8.2.2=py311hecd8cb5_0
- terminado=0.17.1=py311hecd8cb5_0
- tinycss2=1.2.1=py311hecd8cb5_0
- tk=8.6.12=h5d9f67b_0
- tomli=2.0.1=py311hecd8cb5_0
- toolz=0.12.0=py311hecd8cb5_0
- tornado=6.2=py311h6c40b1e_0
- traitlets=5.7.1=py311hecd8cb5_0
- typing-extensions=4.5.0=py311hecd8cb5_0
- typing_extensions=4.5.0=py311hecd8cb5_0
- tzdata=2023c=h04d1e81_0
- urllib3=1.26.15=py311hecd8cb5_0
- utf8proc=2.6.1=h9ed2024_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py311hecd8cb5_1
- websocket-client=0.58.0=py311hecd8cb5_4
- wheel=0.38.4=py311hecd8cb5_0
- widgetsnbextension=4.0.5=py311hecd8cb5_0
- xyzservices=2022.9.0=py311hecd8cb5_1
- xz=5.4.2=h6c40b1e_0
- yaml=0.2.5=haf1e3a3_0
- zeromq=4.3.4=h23ab428_0
- zict=2.2.0=py311hecd8cb5_0
- zipp=3.11.0=py311hecd8cb5_0
- zlib=1.2.13=h4dc903c_0
- zstd=1.5.5=hc035e20_0
- pip:
- bcrypt==4.1.2
- paramiko==3.4.0
- pynacl==1.5.0
prefix: /Users/daphnekontogiorgos-heintz/opt/anaconda3/envs/nanopore