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QTI-Seq vs TI-Seq #44

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bshim181 opened this issue Jan 10, 2025 · 1 comment
Open

QTI-Seq vs TI-Seq #44

bshim181 opened this issue Jan 10, 2025 · 1 comment

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@bshim181
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bshim181 commented Jan 10, 2025 •
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Hello,

I would like to conduct a differential analysis at TI level but data that I have available is restricted to LTM treated TI Seq data (GTI-Seq).

I am aware from previous discussions that QTI-Seq is more suitable for tisdiff analysis, but I was wondering if it is possible to run it with LTM treated TI Seq data and treat the results with caution. If not, if there exists a way around it.
@zhpn1024
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Yes, you can run with TI Seq, and the results may be inaccurate.

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@zhpn1024 @bshim181