Merge pull request #2 from 4ever2/project-setup

Setup Maven build and CI

.github/dependabot.yml

@@ -0,0 +1,14 @@
+version: 2
+updates:
+  - package-ecosystem: "github-actions"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+      day: "monday"
+    labels:
+      - "part: dependencies"
+  - package-ecosystem: maven
+    directory: "/"
+    schedule:
+      interval: "weekly"
+      day: "monday"

.github/workflows/build-java.yml

@@ -0,0 +1,34 @@
+name: 'Build ImageJ Plugin'
+on:
+  push:
+    branches:
+    - 'master'
+    paths:
+    - 'ijplugin/**/*'
+  pull_request:
+    paths:
+    - 'ijplugin/**/*'
+permissions:
+  contents: 'read'
+jobs:
+  build:
+    runs-on: 'ubuntu-latest'
+    steps:
+      - name: Checkout branch ${{ github.ref_name }}
+        uses: actions/checkout@v4
+      - name: Set up JDK 11 for x64
+        uses: actions/setup-java@v3
+        with:
+          java-version: '8'
+          distribution: 'zulu'
+          cache: maven
+      - name: Build
+        run: cd ijplugin && mvn package
+      - name: Prepare artifact
+        run: mkdir staging && cp ijplugin/target/*.jar staging
+      - name: Upload artifact
+        uses: actions/upload-artifact@v3
+        with:
+          name: Package
+          path: staging/*.jar
+          retention-days: 7

.github/workflows/publish-java.yml

@@ -0,0 +1,23 @@
+name: Publish package to GitHub Packages
+on:
+  push:
+    tags:
+      - 'v[0-9]+.[0-9]+.[0-9]+'
+permissions:
+  contents: 'read'
+jobs:
+  build:
+    runs-on: 'ubuntu-latest'
+    steps:
+      - name: Checkout branch ${{ github.ref_name }}
+        uses: actions/checkout@v4
+      - name: Set up JDK 11 for x64
+        uses: actions/setup-java@v3
+        with:
+          java-version: '8'
+          distribution: 'zulu'
+          cache: maven
+      - name: Publish package
+        run: mvn deploy
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

ijplugin/pom.xml

@@ -0,0 +1,98 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 https://maven.apache.org/xsd/maven-4.0.0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+
+	<groupId>com.github.4ever2</groupId>
+	<artifactId>ImageDecorrelationAnalysis</artifactId>
+	<packaging>jar</packaging>
+	<version>1.1.8</version>
+
+	<name>Image Decorrelation Analysis</name>
+	<description>Image Decorrelation Analysis plugin for ImageJ.</description>
+	<url>https://github.com/4ever2/ImDecorr</url>
+
+	<licenses>
+		<license>
+			<name>GNU General Public License v3</name>
+			<url>https://www.gnu.org/licenses/gpl.html</url>
+			<distribution>repo</distribution>
+		</license>
+	</licenses>
+
+	<developers>
+		<developer>
+			<id>0000-0002-3101-6641</id>
+			<name>Adrien Descloux</name>
+			<email>adrien.descloux@epfl.ch</email>
+			<organization>École Polytechnique Fédérale de Lausanne</organization>
+			<roles>
+				<role>author</role>
+			</roles>
+		</developer>
+		<developer>
+			<id>0000-0003-4515-4356</id>
+			<name>Kristin Grußmayer</name>
+			<organization>École Polytechnique Fédérale de Lausanne</organization>
+			<roles>
+				<role>author</role>
+			</roles>
+		</developer>
+		<developer>
+			<id>0000-0001-8194-2785</id>
+			<name>Aleksandra Radenovic</name>
+			<email>aleksandra.radenovic@epfl.ch</email>
+			<organization>École Polytechnique Fédérale de Lausanne</organization>
+			<roles>
+				<role>author</role>
+			</roles>
+		</developer>
+	</developers>
+	<contributors>
+		<contributor>
+			<name>4ever2</name>
+			<url>https://github.com/4ever2</url>
+			<organization>Aarhus University</organization>
+			<roles><role>maintainer</role></roles>
+			<properties><id>4ever2</id></properties>
+		</contributor>
+	</contributors>
+
+	<issueManagement>
+		<system>GitHub</system>
+		<url>https://github.com/4ever2/ImDecorr/issues/</url>
+	</issueManagement>
+	<ciManagement>
+		<system>GitHub Actions</system>
+		<url>https://github.com/4ever2/ImDecorr/actions</url>
+	</ciManagement>
+	<scm>
+		<connection>scm:git:https://github.com/4ever2/ImDecorr</connection>
+		<developerConnection>scm:git:git@github.com:4ever2/ImDecorr</developerConnection>
+		<tag>HEAD</tag>
+		<url>https://github.com/4ever2/ImDecorr</url>
+	</scm>
+
+	<dependencies>
+		<!-- ImageJ dependencies -->
+		<dependency>
+			<groupId>net.imagej</groupId>
+			<artifactId>ij</artifactId>
+			<version>1.53t</version>
+		</dependency>
+	</dependencies>
+
+	<properties>
+		<license.licenseName>gpl_v3</license.licenseName>
+		<maven.compiler.source>1.8</maven.compiler.source>
+		<maven.compiler.target>1.8</maven.compiler.target>
+	</properties>
+
+	<distributionManagement>
+		<repository>
+		<id>github</id>
+		<name>GitHub Packages</name>
+		<url>https://maven.pkg.github.com/4ever2/ImDecorr</url>
+		</repository>
+	</distributionManagement>
+</project>