Allen Institute for Neural Dynamics
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aind-data-schema
aind-data-schema PublicA library that defines AIND data schema and validates JSON.
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aind-ephys-spikesort-kilosort25-full
aind-ephys-spikesort-kilosort25-full PublicCodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
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aind-ephys-pipeline
aind-ephys-pipeline PublicAIND pipeline for processing extracellular electrophysiology data
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segmentation-skeleton-metrics
segmentation-skeleton-metrics PublicA Python package for evaluating a predicted segmentation of neural arbors by using skeleton-based metrics. This tool detects topological mistakes (i.e. splits and merges) in a predicted segmentatio…
Python 6
Repositories
- aind-software-docs Public
Centralized documentation repository for Scientific Computing, publishes to RTD
AllenNeuralDynamics/aind-software-docs’s past year of commit activity - Aind.Behavior.ExperimentLauncher Public
Source for for a minimal framework that can be used to build experimental interfaces
AllenNeuralDynamics/Aind.Behavior.ExperimentLauncher’s past year of commit activity - dynamic-foraging-task Public
Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control
AllenNeuralDynamics/dynamic-foraging-task’s past year of commit activity