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sukanka edited this page Jul 7, 2022 · 6 revisions

Use firstly

Add the fllowing to the /etc/pacman.conf

[bioarchlinux]
Server = https://repo.bioarchlinux.org/$arch

You can repleace the repo.bioarchlinux with any mirror in mirrorlist

Then import GPG key

$ pacman-key --recv-keys B1F96021DB62254D
$ pacman-key --finger B1F96021DB62254D
$ pacman-key --lsign-key B1F96021DB62254D

Use easily

Add the fllowing to the /etc/pacman.conf

[bioarchlinux]
Server = https://repo.bioarchlinux.org/$arch

You can repleace the repo.bioarchlinux with any mirror in mirrorlist

install GPG keyring to use bioarchlinux

sudo pacman -Sy && sudo pacman -S bioarchlinux-keyring

Make install.packges() call pacman

First, install r-bspm,

# pacman -S r-bspm

and add the following line to your ~/.Rprofile so that pacman will take over install.packages.

bspm::enable()

Below is an example.

r$> install.packages("cssam")
[sudo] password for user:
Install system packages as root...
:: Synchronizing package databases...
 core
 extra
 community
 multilib
 archlinuxcn
 arch4edu
 bioarchlinux
:: Retrieving packages...
 r-cssam-1.2.4-1-any
:: Processing package changes...
(1/1) r-cssam