fix: genomeref for freec

CCBR · Dec 4, 2024 · 7e672b9 · 7e672b9
1 parent 7306cbe
commit 7e672b9
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/modules/local/freec.nf b/modules/local/freec.nf
@@ -1,5 +1,7 @@
 //FREEC
 //mm10 Paired-Sequenza, FREEC-tumor only
+GENOMEREF = file(params.genomes[params.genome].genome)
+
 //CNV Intervals
 if (params.intervals){
     CNVTARGETS = file(params.intervals)