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32 Open 28 Closed
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Issues list

separate dataframe for gene/feature annotations MOSuite RepoName
#85 opened Jan 10, 2025 by kelly-sovacool 2025-01
@kelly-sovacool
Create visualization vignette documentation Improvements or additions to documentation MOSuite RepoName
#84 opened Jan 9, 2025 by kelly-sovacool
Add NIDAP template - Batch Correction bug Something isn't working enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#83 opened Jan 8, 2025 by kelly-sovacool 2025-01
@kelly-sovacool
feature: gsea rank column in DE output enhancement New feature or request MOSuite RepoName
#81 opened Jan 2, 2025 by kelly-sovacool
design: allow extra user-defined columns in sample metadata for flexible multifactor analyses MOSuite RepoName
#71 opened Oct 29, 2024 by kelly-sovacool
add MOobject design diagrams to docs documentation Improvements or additions to documentation MOSuite RepoName
#70 opened Oct 23, 2024 by kelly-sovacool
built-in function to retrieve metadata, genes, etc as one dataframe MOSuite RepoName
#69 opened Oct 23, 2024 by kelly-sovacool
support different types of normalized counts MOSuite RepoName
#68 opened Oct 23, 2024 by kelly-sovacool
use custom cpm function instead of edger MOSuite RepoName
#65 opened Sep 12, 2024 by kelly-sovacool
@kelly-sovacool
allow users to specify multiple gene column names on dataset creation MOSuite RepoName
#64 opened Sep 12, 2024 by kelly-sovacool
@kelly-sovacool
1
change count thresholds to be fractions instead of integers MOSuite RepoName
#63 opened Aug 20, 2024 by kelly-sovacool
4
Clean Filter.R MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#62 opened Aug 19, 2024 by sync-by-unito bot 2025-01
@kelly-sovacool
1
default color set within dataset enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board plots
#60 opened Aug 16, 2024 by kelly-sovacool 2025-01
MVP vignette documentation Improvements or additions to documentation MOSuite RepoName mvp minimum viable product [ iteration 2 ]
#56 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - DEG Gene List enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#54 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Venn Diagram enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#53 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Volcano Enhanced enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#52 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - Volcano Summary enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#51 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - DEG enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#50 opened Jul 9, 2024 by kelly-sovacool
Add NIDAP template - 3DPCA enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#49 opened Jul 9, 2024 by kelly-sovacool 2025-01
Add NIDAP template - Heatmap enhancement New feature or request MOSuite RepoName mvp minimum viable product [ iteration 2 ] NIDAP sync with the NIDAP team's Trello board
#48 opened Jul 9, 2024 by kelly-sovacool 2025-01
reconcile gh-actions with NIDAP team ci continuous integration reneeTools RepoName
#45 opened Jul 9, 2024 by kelly-sovacool
@kelly-sovacool
handle gene_id and GeneName columns from RENEE enhancement New feature or request reneeTools RepoName
#44 opened Jul 9, 2024 by kelly-sovacool
gene co-expression network inference enhancement New feature or request reneeTools RepoName
#25 opened Feb 27, 2024 by kelly-sovacool
batch effect correction enhancement New feature or request
#19 opened Dec 29, 2023 by kelly-sovacool
1
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