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@CalCOFI

CalCOFI

one of the longest marine ecosystem time series (70+ years) | open data to support climate change solutions

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  1. rCRUX rCRUX Public

    A repository for my work on rCRUX

    R 11 7

  2. OceanView OceanView Public

    App that can incentivize ocean users to report their observations

    Dart 1

  3. api api Public

    Test application programming interface (API)

    R 1

  4. capstone capstone Public

    Capstone project for CCDSP fellowship, where we will store data and code

    R 1 2

  5. hypoxia-story hypoxia-story Public

    HTML 1

  6. larvae-cinms larvae-cinms Public

    Extraction of CalCOFI larvae data for Channel Islands Webenized Condition Report

    HTML 1

Repositories

Showing 10 of 21 repositories
  • apps Public

    Shiny app demo for CalCOFI

    CalCOFI/apps’s past year of commit activity
    R 0 MIT 0 10 0 Updated Jan 22, 2025
  • server Public

    calcofi.io server setup for R Shiny apps, RStudio IDE, R Plumber API, temporary PostGIS database, pg_tileserv

    CalCOFI/server’s past year of commit activity
    Go 0 MIT 0 6 0 Updated Jan 22, 2025
  • workflows Public

    helper scripts in R for common workflows

    CalCOFI/workflows’s past year of commit activity
    HTML 0 MIT 0 22 0 Updated Jan 14, 2025
  • marmam-app Public Forked from PSTAT197-F23/Capstone-Scripps

    Collaboration of UCSB Data Science Capstone students and CalCOFI to generate RShiny App for visualizing CalCOFI marine mammal visual observations and eDNA detections

    CalCOFI/marmam-app’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Dec 16, 2024
  • CalCOFI.github.io Public

    Default Github products website

    CalCOFI/CalCOFI.github.io’s past year of commit activity
    CSS 0 MIT 0 3 0 Updated Dec 16, 2024
  • api Public

    Test application programming interface (API)

    CalCOFI/api’s past year of commit activity
    R 1 0 3 0 Updated Dec 10, 2024
  • docs Public

    Help documentation for the constellation of webenized and workflow products (in bookdown)

    CalCOFI/docs’s past year of commit activity
    Mermaid 0 MIT 0 2 0 Updated Dec 4, 2024
  • SaferSeafood Public

    Repository containing files and data for developing the R Shiny online application.

    CalCOFI/SaferSeafood’s past year of commit activity
    HTML 0 1 5 0 Updated Nov 16, 2024
  • eDNA-protocols Public

    Protocols for sampling, processing, and analysis of eDNA collected on CalCOFI cruises. All protocols are formatted according to guidelines from Better Biomolecular Ocean Practices (BeBOP) using Minimum Information about an Omics Protocol (MIOP) terms.

    CalCOFI/eDNA-protocols’s past year of commit activity
    0 CC0-1.0 0 0 0 Updated Oct 1, 2024
  • calcofi4r Public

    R package of data wrangling and visualization functions for working with CalCOFI data

    CalCOFI/calcofi4r’s past year of commit activity
    R 0 2 4 0 Updated Sep 10, 2024
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