update example

Clinical-Genomics · Jun 25, 2024 · 9d1a65d · 9d1a65d
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diff --git a/docs/example/AKAP9_BRAF.html b/docs/example/AKAP9_BRAF.html
diff --git a/docs/example/BRD4_NUTM1.html b/docs/example/BRD4_NUTM1.html
diff --git a/docs/example/CD74_ROS1.html b/docs/example/CD74_ROS1.html
diff --git a/docs/example/EML4_ALK.html b/docs/example/EML4_ALK.html
diff --git a/docs/example/ETV6_NTRK3.html b/docs/example/ETV6_NTRK3.html
diff --git a/docs/example/EWSR1_ATF1.html b/docs/example/EWSR1_ATF1.html
diff --git a/docs/example/EWSR1_FLI1.html b/docs/example/EWSR1_FLI1.html
diff --git a/docs/example/FGFR3_TACC3.html b/docs/example/FGFR3_TACC3.html
diff --git a/docs/example/FIP1L1_PDGFRA.html b/docs/example/FIP1L1_PDGFRA.html
diff --git a/docs/example/GOPC_ROS1.html b/docs/example/GOPC_ROS1.html
diff --git a/docs/example/HOOK3_RET.html b/docs/example/HOOK3_RET.html
diff --git a/docs/example/NPM1_ALK.html b/docs/example/NPM1_ALK.html
diff --git a/docs/example/TMPRSS2_ETV1.html b/docs/example/TMPRSS2_ETV1.html
diff --git a/docs/example/fusion_genes_mqc.json b/docs/example/fusion_genes_mqc.json
@@ -1 +1 @@
-{"id":"fusion_genes","section_name":"Fusion genes","description":"Number of fusion genes found by various tools","plot_type":"bargraph","pconfig":{"id":"barplot_config_only","title":"Detected fusion genes","ylab":"Number of detected fusion genes"},"data":{"example-sample":{"COSMIC":13,"Mitelman":14,"FusionGDB":12,"FusionGDB2":12}}}
+{"id":"fusion_genes","section_name":"Fusion genes","description":"Number of fusion genes found by various tools","plot_type":"bargraph","pconfig":{"id":"barplot_config_only","title":"Detected fusion genes","ylab":"Number of detected fusion genes"},"data":{"example-sample":{"together":11,"COSMIC":13,"Mitelman":14,"FusionGDB2":12}}}
diff --git a/docs/example/fusion_list.tsv b/docs/example/fusion_list.tsv
@@ -1,21 +1,18 @@
 FGFR3--TACC3
 GOPC--ROS1
-AKAP9--BRAF
 FIP1L1--PDGFRA
-BRD4--NUTM1
+IGH@--CRLF2
+AKAP9--BRAF
+EWSR1--ATF1
 HOOK3--RET
-TMPRSS2--ETV1
-CD74--ROS1
 EWSR1--FLI1
-EWSR1--ATF1
+TMPRSS2--ETV1
 ETV6--NTRK3
+BRD4--NUTM1
 CIC--DUX4
-IGH@--CRLF2
 DUX4--IGH@
 EML4--ALK
+CD74--ROS1
 MALT1--IGH@
 NPM1--ALK
 CD74--AL132671.2
-SLC6A15--MT-ND2
-MT-ATP8--MT-ATP6
-IFT81--NDRG4
diff --git a/docs/example/fusion_list_filtered.tsv b/docs/example/fusion_list_filtered.tsv
@@ -1,14 +1,13 @@
 FGFR3--TACC3
 GOPC--ROS1
-AKAP9--BRAF
 FIP1L1--PDGFRA
-BRD4--NUTM1
+AKAP9--BRAF
+EWSR1--ATF1
 HOOK3--RET
-TMPRSS2--ETV1
-CD74--ROS1
 EWSR1--FLI1
-EWSR1--ATF1
+TMPRSS2--ETV1
 ETV6--NTRK3
-CIC--DUX4
+BRD4--NUTM1
 EML4--ALK
+CD74--ROS1
 NPM1--ALK
diff --git a/docs/example/fusions.csv b/docs/example/fusions.csv
diff --git a/docs/example/index.html b/docs/example/index.html
Original file line number	Diff line number	Diff line change
		@@ -1 +1 @@
		{"id":"fusion_genes","section_name":"Fusion genes","description":"Number of fusion genes found by various tools","plot_type":"bargraph","pconfig":{"id":"barplot_config_only","title":"Detected fusion genes","ylab":"Number of detected fusion genes"},"data":{"example-sample":{"COSMIC":13,"Mitelman":14,"FusionGDB":12,"FusionGDB2":12}}}
		{"id":"fusion_genes","section_name":"Fusion genes","description":"Number of fusion genes found by various tools","plot_type":"bargraph","pconfig":{"id":"barplot_config_only","title":"Detected fusion genes","ylab":"Number of detected fusion genes"},"data":{"example-sample":{"together":11,"COSMIC":13,"Mitelman":14,"FusionGDB2":12}}}