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2.1.5p5#63

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rannick wants to merge 41 commits intomasterClinical-Genomics/fusion-report:masterfrom 2.1.5p5Clinical-Genomics/fusion-report-old-fork:2.1.5p5Copy head branch name to clipboard

+179-29

Commits

Commits on Mar 14, 2022

• fix mypy error

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Commits on Aug 19, 2022

• Merge branch 'matq007:master' into master

  rannick

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• fix mitelman + fusiongdb2 enabled

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Commits on Aug 30, 2022

• add workflow to build docker image

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  76cff27

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• edit workflow to build docker image

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  cde799a

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• edit workflow to build docker image

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  67f272f

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• edit workflow to build docker image

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Commits on Sep 12, 2022

• rename fusions table of fusiongdb2

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Commits on Feb 22, 2023

• add qiagen option for downloading cosmic db

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• Merge branch 'mittelman_fix' into add_qiagen_for_cosmic

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• Delete fusion_report.log.2023-02-21

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  acd7c46

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• Merge pull request #1 from Clinical-Genomics/add_qiagen_for_cosmic

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Commits on Feb 28, 2023

• Small fix for setuppy

  apeltzer

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  c782130

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• Attempt at fixing missing definition

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  642a109

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• Modified net classs

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  88b069c

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• Added small change

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  e8289ff

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• Fix token handling

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  0dc10a5

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• Small further bugfix

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  7b764ed

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• Looks faster now

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  456e685

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• Download should go to output

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  dd1cf01

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• Add function to extract only fusion file ids

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  f897116

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• Access file

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• This should do

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• This works reliably

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• Merge pull request #2 from apeltzer/mittelman_fix

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• change tag of docker image

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  cf0abab

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• Silencio

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  d692b48

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• Merge pull request #3 from apeltzer/mittelman_fix

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Commits on Mar 12, 2023

• remove staticmethod for include_raw

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  988bc4d

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• change docker version

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Commits on Aug 28, 2023

• remove MACOSX files from being taken into account

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  9449956

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• update docker image

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• update docker for master

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• Merge pull request #4 from Clinical-Genomics/2.1.5p3.0

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Commits on Sep 15, 2023

• fix 403 error for fusiongdb

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Commits on Sep 18, 2023

• update docker image

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• Merge pull request #5 from Clinical-Genomics/update_docker_image

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• add manual docker workflow

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  fa633da

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• Merge pull request #6 from Clinical-Genomics/2.1.5p3.0

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Commits on Oct 18, 2023

• update cosmic to v98

  rannick

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  fbcec1a

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• update docker image version

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