Update package installation files and development environment (#248)

- Imported configuration settings from setup.cfg to pyproject.toml. Murfey can now be installed solely off pyproject.toml.
- Updated types and versions of pre-commit hooks used for this repository.

---------

Co-authored-by: Eu Pin Tien <wjr38212@ws466.diamond.ac.uk>
Co-authored-by: Daniel Hatton <daniel.hatton@diamond.ac.uk>

.azure-pipelines/azure-pipelines.yml

@@ -4,142 +4,142 @@ variables:
 trigger:
   branches:
     include:
-    - '*'
+      - "*"
   tags:
     include:
-    - '*'
+      - "*"
 
 resources:
   containers:
-  - container: mariadb
-    image: mariadb:10.8
-    env:
-      MYSQL_DATABASE: ispybtest
-      MYSQL_ROOT_PASSWORD: mysql_root_pwd
-    ports:
-    - 3306:3306
+    - container: mariadb
+      image: mariadb:10.8
+      env:
+        MYSQL_DATABASE: ispybtest
+        MYSQL_ROOT_PASSWORD: mysql_root_pwd
+      ports:
+        - 3306:3306
 
 stages:
-- stage: static
-  displayName: Static Analysis
-  jobs:
-  - job: checks
-    displayName: static code analysis
-    pool:
-      vmImage: ubuntu-20.04
-    steps:
-      - task: UsePythonVersion@0.206.0
-        displayName: Set up python
-        inputs:
-          versionSpec: 3.10
-
-      - bash: |
-          python .azure-pipelines/syntax-validation.py
-        displayName: Syntax validation
-
-      - bash: |
-          pip install --disable-pip-version-check flake8
-          python .azure-pipelines/flake8-validation.py
-        displayName: Flake8 validation
-
-- stage: build
-  displayName: Build
-  dependsOn:
-  jobs:
-  - job: build
-    displayName: build package
-    pool:
-      vmImage: ubuntu-20.04
-    steps:
-      - task: UsePythonVersion@0.206.0
-        displayName: Set up python
-        inputs:
-          versionSpec: 3.10
-
-      - bash: |
-          pip install --disable-pip-version-check collective.checkdocs wheel
-        displayName: Install dependencies
-
-      - bash: |
-          set -ex
-          python setup.py sdist bdist_wheel
-          mkdir -p dist/pypi
-          shopt -s extglob
-          mv -v dist/!(pypi) dist/pypi
-          git archive HEAD | gzip > dist/repo-source.tar.gz
-          ls -laR dist
-        displayName: Build python package
-
-      - bash: |
-          wget -t 3 --waitretry=20 https://github.com/DiamondLightSource/ispyb-database/releases/download/v$(DATABASE_SCHEMA)/ispyb-database-$(DATABASE_SCHEMA).tar.gz -O dist/ispyb-database.tar.gz
-        displayName: Download ISPyB DB schema v$(DATABASE_SCHEMA) for tests
-
-      - task: PublishBuildArtifacts@1.200.0
-        displayName: Store artifact
-        inputs:
-          pathToPublish: dist/
-          artifactName: package
-
-      - bash: python setup.py checkdocs
-        displayName: Check package description
-
-- stage: tests
-  displayName: Run unit tests
-  dependsOn:
-  - static
-  - build
-  jobs:
-  - job: linux
-    pool:
-      vmImage: ubuntu-20.04
-    strategy:
-      matrix:
-        python39:
-          PYTHON_VERSION: 3.9
-        python310:
-          PYTHON_VERSION: 3.10
-        python311:
-          PYTHON_VERSION: 3.11
-    services:
-      db: mariadb
-    steps:
-    - template: ci.yml
-
-- stage: deploy
-  displayName: Publish release
-  dependsOn:
-  - tests
-  condition: and(succeeded(), startsWith(variables['Build.SourceBranch'], 'refs/tags/'))
-  jobs:
-  - job: pypi
-    displayName: Publish pypi release
-    pool:
-      vmImage: ubuntu-20.04
-    steps:
-      - checkout: none
-
-      - task: UsePythonVersion@0.206.0
-        displayName: Set up python
-        inputs:
-          versionSpec: 3.10
-
-      - task: DownloadBuildArtifacts@0.206.0
-        displayName: Get pre-built package
-        inputs:
-          buildType: 'current'
-          downloadType: 'single'
-          artifactName: 'package'
-          downloadPath: '$(System.ArtifactsDirectory)'
-
-      - script: |
-          pip install --disable-pip-version-check twine
-        displayName: Install twine
-
-      - task: TwineAuthenticate@1.208.0
-        displayName: Set up credentials
-        inputs:
-          pythonUploadServiceConnection: pypi-murfey
-
-      - bash: |
-          python -m twine upload -r pypi-murfey --config-file $(PYPIRC_PATH) $(System.ArtifactsDirectory)/package/pypi/*.tar.gz $(System.ArtifactsDirectory)/package/pypi/*.whl
-        displayName: Publish package
+  - stage: static
+    displayName: Static Analysis
+    jobs:
+      - job: checks
+        displayName: static code analysis
+        pool:
+          vmImage: ubuntu-20.04
+        steps:
+          - task: UsePythonVersion@0.206.0
+            displayName: Set up python
+            inputs:
+              versionSpec: 3.10
+
+          - bash: |
+              python .azure-pipelines/syntax-validation.py
+            displayName: Syntax validation
+
+          - bash: |
+              pip install --disable-pip-version-check flake8 flake8-pyproject
+              python .azure-pipelines/flake8-validation.py
+            displayName: Flake8 validation
+
+  - stage: build
+    displayName: Build
+    dependsOn:
+    jobs:
+      - job: build
+        displayName: build package
+        pool:
+          vmImage: ubuntu-20.04
+        steps:
+          - task: UsePythonVersion@0.206.0
+            displayName: Set up python
+            inputs:
+              versionSpec: 3.10
+
+          - bash: |
+              pip install --disable-pip-version-check collective.checkdocs wheel
+            displayName: Install dependencies
+
+          - bash: |
+              set -ex
+              python setup.py sdist bdist_wheel
+              mkdir -p dist/pypi
+              shopt -s extglob
+              mv -v dist/!(pypi) dist/pypi
+              git archive HEAD | gzip > dist/repo-source.tar.gz
+              ls -laR dist
+            displayName: Build python package
+
+          - bash: |
+              wget -t 3 --waitretry=20 https://github.com/DiamondLightSource/ispyb-database/releases/download/v$(DATABASE_SCHEMA)/ispyb-database-$(DATABASE_SCHEMA).tar.gz -O dist/ispyb-database.tar.gz
+            displayName: Download ISPyB DB schema v$(DATABASE_SCHEMA) for tests
+
+          - task: PublishBuildArtifacts@1.200.0
+            displayName: Store artifact
+            inputs:
+              pathToPublish: dist/
+              artifactName: package
+
+          - bash: python setup.py checkdocs
+            displayName: Check package description
+
+  - stage: tests
+    displayName: Run unit tests
+    dependsOn:
+      - static
+      - build
+    jobs:
+      - job: linux
+        pool:
+          vmImage: ubuntu-20.04
+        strategy:
+          matrix:
+            python39:
+              PYTHON_VERSION: 3.9
+            python310:
+              PYTHON_VERSION: 3.10
+            python311:
+              PYTHON_VERSION: 3.11
+        services:
+          db: mariadb
+        steps:
+          - template: ci.yml
+
+  - stage: deploy
+    displayName: Publish release
+    dependsOn:
+      - tests
+    condition: and(succeeded(), startsWith(variables['Build.SourceBranch'], 'refs/tags/'))
+    jobs:
+      - job: pypi
+        displayName: Publish pypi release
+        pool:
+          vmImage: ubuntu-20.04
+        steps:
+          - checkout: none
+
+          - task: UsePythonVersion@0.206.0
+            displayName: Set up python
+            inputs:
+              versionSpec: 3.10
+
+          - task: DownloadBuildArtifacts@0.206.0
+            displayName: Get pre-built package
+            inputs:
+              buildType: "current"
+              downloadType: "single"
+              artifactName: "package"
+              downloadPath: "$(System.ArtifactsDirectory)"
+
+          - script: |
+              pip install --disable-pip-version-check twine
+            displayName: Install twine
+
+          - task: TwineAuthenticate@1.208.0
+            displayName: Set up credentials
+            inputs:
+              pythonUploadServiceConnection: pypi-murfey
+
+          - bash: |
+              python -m twine upload -r pypi-murfey --config-file $(PYPIRC_PATH) $(System.ArtifactsDirectory)/package/pypi/*.tar.gz $(System.ArtifactsDirectory)/package/pypi/*.whl
+            displayName: Publish package