fix "Search for Samples or Studies" R notebook: sparse df merge

EBI-Metagenomics · Mar 12, 2024 · e58a54c · e58a54c
1 parent 5bd8f4d
commit e58a54c
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/src/notebooks/R Examples/Search for Samples or Studies.ipynb b/src/notebooks/R Examples/Search for Samples or Studies.ipynb
@@ -88,6 +88,7 @@
    },
    "outputs": [],
    "source": [
+    "library(dplyr)\n",
     "library(vegan)\n",
     "library(ggplot2)\n",
     "library(phyloseq)\n",
@@ -151,7 +152,7 @@
    "source": [
     "samps_np <- mgnify_query(mg, \"samples\", latitude_gte=88, maxhits=1)\n",
     "samps_sp <- mgnify_query(mg, \"samples\", latitude_lte=-88, maxhits=1)\n",
-    "samps_polar <- rbind(samps_np, samps_sp)"
+    "samps_polar <- bind_rows(samps_np, samps_sp)"
    ]
   },
   {