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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,3 @@ | ||
| setenv("INSIDE_GITHUB_ACTIONS", "true") | ||
| -- Interfere with PATH so Lmod keeps a record | ||
| prepend_path("PATH", "/snap/bin") |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,58 @@ | ||
| #!/bin/bash | ||
| # | ||
| # This script figures out the latest version of EasyBuild being used for the installation of easystack | ||
| # files. | ||
| # | ||
| # This file is part of the EESSI software layer, see | ||
| # https://github.com/EESSI/software-layer.git | ||
| # | ||
| # author: Alan O'Cais (CECAM) | ||
| # | ||
| # license: GPLv2 | ||
| # | ||
|
|
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| EESSI_VERSION=${EESSI_VERSION:-"2023.06"} | ||
|
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| directory="easystacks/software.eessi.io/${EESSI_VERSION}" | ||
| # List of example filenames | ||
| files=($(find "$directory" -name "*.yml" | grep -e '-eb-')) | ||
| [ -n "$DEBUG" ] && echo "${files[@]}" | ||
|
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| versions=() | ||
| # Loop over each filename | ||
| for filename in "${files[@]}"; do | ||
| # Extract the semantic version using grep | ||
| version=$(echo "$filename" | grep -oP '(?<=eb-)\d+\.\d+\.\d+?(?=-)') | ||
|
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| # Output the result | ||
| [ -n "$DEBUG" ] && echo "Filename: $filename" | ||
| [ -n "$DEBUG" ] && echo "Extracted version: $version" | ||
| [ -n "$DEBUG" ] && echo | ||
| versions+=("$version") | ||
| done | ||
| highest_version=$(printf "%s\n" "${versions[@]}" | sort -V | tail -n 1) | ||
|
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| [ -n "$DEBUG" ] && echo "Highest version: $highest_version" | ||
| [ -n "$DEBUG" ] && echo | ||
| [ -n "$DEBUG" ] && echo "Matching files:" | ||
| all_latest_easystacks=($(find $directory -type f -name "*eb-$highest_version*.yml")) | ||
|
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| accel_latest_easystacks=() | ||
| cpu_latest_easystacks=() | ||
|
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| # Loop through the array and split based on partial matching of string | ||
| accel="/accel/" | ||
| for item in "${all_latest_easystacks[@]}"; do | ||
| if [[ "$item" == *"$accel"* ]]; then | ||
| accel_latest_easystacks+=("$item") | ||
| else | ||
| cpu_latest_easystacks+=("$item") | ||
| fi | ||
| done | ||
|
|
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| # Output the results | ||
| if [ -n "$ACCEL_EASYSTACKS" ]; then | ||
| echo "${accel_latest_easystacks[@]}" | ||
| else | ||
| echo "${cpu_latest_easystacks[@]}" | ||
| fi |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,50 @@ | ||
| #!/bin/bash | ||
| EESSI_VERSION="2023.06" | ||
| export LMOD_PAGER=cat | ||
|
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| # initialize assert framework | ||
| if [ ! -d assert.sh ]; then | ||
| echo "assert.sh not cloned." | ||
| echo "" | ||
| echo "run \`git clone https://github.com/lehmannro/assert.sh.git\`" | ||
| exit 1 | ||
| fi | ||
| . assert.sh/assert.sh | ||
|
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| TEST_SHELLS=("bash" "zsh" "fish" "ksh") | ||
| SHELLS=$@ | ||
|
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| for shell in ${SHELLS[@]}; do | ||
| echo = | awk 'NF += (OFS = $_) + 100' | ||
| echo RUNNING TESTS FOR SHELL: $shell | ||
| echo = | awk 'NF += (OFS = $_) + 100' | ||
| if [[ ! " ${TEST_SHELLS[*]} " =~ [[:space:]]${shell}[[:space:]] ]]; then | ||
| ### EXCEPTION FOR CSH ### | ||
| echo -e "\033[33mWe don't now how to test the shell '$shell', PRs are Welcome.\033[0m" | ||
| else | ||
| # TEST 1: Source Script and check Module Output | ||
| assert "$shell -c 'source init/lmod/$shell' 2>&1 " "EESSI/$EESSI_VERSION loaded successfully" | ||
| # TEST 2: Check if module overviews first section is the loaded EESSI module | ||
| MODULE_SECTIONS=($($shell -c "source init/lmod/$shell 2>/dev/null; module ov 2>&1 | grep -e '---'")) | ||
| PATTERN="/cvmfs/software\.eessi\.io/versions/$EESSI_VERSION/software/linux/x86_64/(intel/haswell|amd/zen3)/modules/all" | ||
| assert_raises 'echo "${MODULE_SECTIONS[1]}" | grep -E "$PATTERN"' | ||
| # TEST 3: Check if module overviews second section is the EESSI init module | ||
| assert "echo ${MODULE_SECTIONS[4]}" "/cvmfs/software.eessi.io/versions/$EESSI_VERSION/init/modules" | ||
| # Test 4: Load Python module and check version | ||
| command="$shell -c 'source init/lmod/$shell 2>/dev/null; module load Python/3.10.8-GCCcore-12.2.0; python --version'" | ||
| expected="Python 3.10.8" | ||
| assert "$command" "$expected" | ||
| # Test 5: Load Python module and check path | ||
| PYTHON_PATH=$($shell -c "source init/lmod/$shell 2>/dev/null; module load Python/3.10.8-GCCcore-12.2.0; which python") | ||
| PATTERN="/cvmfs/software\.eessi\.io/versions/$EESSI_VERSION/software/linux/x86_64/(intel/haswell|amd/zen3)/software/Python/3\.10\.8-GCCcore-12\.2\.0/bin/python" | ||
| echo "$PYTHON_PATH" | grep -E "$PATTERN" | ||
| assert_raises 'echo "$PYTHON_PATH" | grep -E "$PATTERN"' | ||
|
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| #End Test Suite | ||
| assert_end "source_eessi_$shell" | ||
| fi | ||
| done | ||
|
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|
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| # RESET PAGER | ||
| export LMOD_PAGER= |
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