Merge pull request #73 from Gengrui-Zhang/devel

0.0.3

.Rbuildignore

@@ -6,3 +6,4 @@
 ^docs$
 ^pkgdown$
 ^\.github$
+^\.vscode$

.gitignore

@@ -1,3 +1,4 @@
+.vscode
 .Rproj.user
 .Rhistory
 .Rdata

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: R2spa
 Title: An R package for two-stage path analysis (2S-PA) to adjust for measurement errors
-Version: 0.0.2
+Version: 0.0.3
 Authors@R: 
   c(
     person(given = "Mark Hok Chio",
@@ -36,12 +36,20 @@ Roxygen: list(markdown = TRUE)
 RoxygenNote: 7.2.3
 Imports: 
     lavaan,
-    MASS
+    MASS,
+    OpenMx
 Suggests: 
+    boot,
+    DiagrammeR,
     knitr,
     magrittr,
+    Matrix,
+    mirt,
+    numDeriv,
     rmarkdown,
-    testthat (>= 3.0.0)
+    psych,
+    testthat (>= 3.0.0),
+    umx
 VignetteBuilder: knitr
 Config/testthat/edition: 3
 URL: https://gengrui-zhang.github.io/R2spa/

NAMESPACE

@@ -1,10 +1,24 @@
 # Generated by roxygen2: do not edit by hand
 
+export(block_diag)
 export(compute_fscore)
 export(get_fs)
+export(get_fs_lavaan)
 export(grandStandardizedSolution)
+export(grand_standardized_solution)
 export(tspa)
+export(tspa_mx_model)
+export(tspa_plot)
+export(vcov_corrected)
+importFrom(OpenMx,mxAlgebraFromString)
+importFrom(OpenMx,mxData)
+importFrom(OpenMx,mxExpectationNormal)
+importFrom(OpenMx,mxFitFunctionML)
+importFrom(OpenMx,mxMatrix)
+importFrom(OpenMx,mxModel)
+importFrom(grDevices,devAskNewPage)
 importFrom(lavaan,cfa)
+importFrom(lavaan,coef)
 importFrom(lavaan,lavInspect)
 importFrom(lavaan,lavTech)
 importFrom(lavaan,lav_func_jacobian_complex)

NEWS.md

@@ -1,3 +1,35 @@
+# R2spa 0.0.3
+
+- Add function `tspa_plot()` for bivariate and residual plots (#23)
+
+- `get_fs()` gains argument `corrected_fsT` for computing corrected error estimates (#50)
+
+- New function `vcov_corrected()` for computing corrected SEs (#39)
+
+- New function `get_fs_lavaan()` for computing factor scores and relevant matrices directly from a `lavaan` output (#61)
+
+- Initial support for 2S-PA with *OpenMx* with `tspa_mx()`
+
+- Update naming of relevant matrices when computing factor scores:
+    * `fsT`: error covariance of factor scores
+    * `fsL`: loading matrix of factor scores
+    * `fsb`: intercepts of factor scores
+    * `scoring_matrix`: weights for computing factor scores from items
+
+- New vignettes for:
+    * Corrected error variance of factor scores (#50)
+    * Corrected standard errors incorporating uncertainty in measurement parameters of factor scores (#39)
+    * Using 2S-PA with EFA scores
+    * Using 2S-PA with OpenMx and definition variables (PR #57)
+    * Latent interaction with categorical indicators (#27)
+    * Growth modeling
+
+- Better error messages for `tspa()` (#53)
+
+- Support mean structure and growth model (#36, #19)
+
+- Clean up code with `lintr` (#33)
+
 # R2spa 0.0.2
 
 - Use `pkgdown` to create website, with GitHub action (#22)