2.1.0

All output files named with the same pattern as used by PCAWG production run.

2.0.6

First release after adopting the new way of building docker image: details

2.0.5

Three main features in this release:

• removed dependence on hardcoded /var/spool/cwl path
• defined addition output files in CWL for individual VCFs
• exposed cpu core and memory to be set by user or use sensible dynamic defaults

2.0.4

• seqware dynamically installed for new users (cwltool quirk)
• proof of concept compatibility with Rabix Bunny demonstrated although output files do not seem to be copied out correctly
• caveat: really ugly Dockerfile due to inability to properly install htslib?

Tested with rabix-cli-1.0.2 and cwltool 1.0.20170828135420

2.0.3

• new icgc reference data location
• gosu upgrade to support multiple users dockstore/dockstore#475
• runs for 206m over test1.json

2.0.2

• fixes to address DO50311

2.0.0-cwl1

Updated for CWL 1.0

2.0.0

Initial dockstore version, 2.x because previous series was 1.x in the non-cleaned up version