Merge branch 'hotfix/v1.9.4'

MYMETA.json

@@ -57,5 +57,5 @@
       }
    },
    "release_status" : "stable",
-   "version" : "v1.9.3"
+   "version" : "v1.9.4"
 }

MYMETA.yml

@@ -39,4 +39,4 @@ requires:
   Test::Fatal: '0.013'
   Try::Tiny: '0.19'
   XML::Simple: '2.2'
-version: v1.9.3
+version: v1.9.4

c/Makefile

@@ -1,4 +1,4 @@
-VERSION=1.9.3
+VERSION=1.9.4
 
 #Compiler
 CC = gcc -O3 -DVERSION='"$(VERSION)"' -g

lib/PCAP.pm

@@ -2,7 +2,7 @@ package PCAP;
 
 ##########LICENCE##########
 # PCAP - NGS reference implementations and helper code for the ICGC/TCGA Pan-Cancer Analysis Project
-# Copyright (C) 2014 ICGC PanCancer Project
+# Copyright (C) 2014,2015 ICGC PanCancer Project
 #
 # This program is free software; you can redistribute it and/or
 # modify it under the terms of the GNU General Public License
@@ -24,7 +24,7 @@ use strict;
 use Const::Fast qw(const);
 use base 'Exporter';
 
-our $VERSION = '1.9.3';
+our $VERSION = '1.9.4';
 our @EXPORT = qw($VERSION);
 
 const my $LICENSE =>
@@ -70,8 +70,7 @@ const my %UPGRADE_PATH => ( '0.1.0'  => 'biobambam,bwa,samtools',
                             '1.8.2'  => '',
                             '1.9.0'  => '',
                             '1.9.1'  => '',
-                            '1.9.2'  => '',
-                            '1.9.3'  => '',
+                            '1.9.4'  => '',
                           );
 
 sub license {

setup.sh

@@ -93,7 +93,7 @@ echo > $INIT_DIR/setup.log
 
 ## grab cpanm:
 rm -f $SETUP_DIR/cpanm
-get_file $SETUP_DIR/cpanm http://xrl.us/cpanm
+get_file $SETUP_DIR/cpanm https://cpanmin.us/
 chmod +x $SETUP_DIR/cpanm
 
 perlmods=( "File::ShareDir" "File::ShareDir::Install" "Const::Fast" )