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@IMCBioinformatics

IMC Bioinformatics

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  1. dada2_16S_workflow dada2_16S_workflow Public

    Amplicon sequencing workflow with snakemake and dada2

    R 2 1

  2. CyTOF CyTOF Public

    Website

    HTML 1

  3. cytofkit cytofkit Public

    Forked from JinmiaoChenLab/cytofkit

    cytofkit: an integrated flow/mass cytometry data analysis pipeline

    R

  4. CATALYST CATALYST Public

    R

  5. IMCBioinformatics.github.io IMCBioinformatics.github.io Public

    HTML

  6. rbootcamp rbootcamp Public

    Forked from ucvm/rbootcamp

    Materials for the R Bootcamp hosted by UCVM

    HTML

Repositories

Showing 10 of 20 repositories
  • dada2_16S_workflow Public

    Amplicon sequencing workflow with snakemake and dada2

    IMCBioinformatics/dada2_16S_workflow’s past year of commit activity
    R 2 MIT 1 0 0 Updated Dec 14, 2024
  • metatranscriptomics Public

    Our GitHub Metatranscriptomics Repository offers tools for analyzing RNA transcripts in microbial communities, revealing their active roles in different environments.

    IMCBioinformatics/metatranscriptomics’s past year of commit activity
    Perl 0 0 0 0 Updated Dec 3, 2024
  • dada2_ITS_workflow Public
    IMCBioinformatics/dada2_ITS_workflow’s past year of commit activity
    R 0 0 0 0 Updated Aug 28, 2024
  • introR Public
    IMCBioinformatics/introR’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 11, 2023
  • CBW_IMPACTT_Workshop Public
    IMCBioinformatics/CBW_IMPACTT_Workshop’s past year of commit activity
    0 0 0 0 Updated Jun 30, 2023
  • shotgun_metagenomics_workshop Public
    IMCBioinformatics/shotgun_metagenomics_workshop’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jan 24, 2023
  • microbiomeworkshop Public template

    16s microbiome analysis workshop

    IMCBioinformatics/microbiomeworkshop’s past year of commit activity
    HTML 0 MIT 1 0 0 Updated Oct 3, 2022
  • IMCBioinformatics.github.io Public
    IMCBioinformatics/IMCBioinformatics.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 2, 2022
  • DAAMS Public

    Differential abundance analysis for shotgun metagenomics

    IMCBioinformatics/DAAMS’s past year of commit activity
    HTML 0 0 1 0 Updated Feb 9, 2022
  • omnibus-and-maaslin2-rscripts-and-hmp2-data Public Forked from biobakery/omnibus-and-maaslin2-rscripts-and-hmp2-data

    Omnibus and Maaslin2 Rscripts and hmp2-data

    IMCBioinformatics/omnibus-and-maaslin2-rscripts-and-hmp2-data’s past year of commit activity
    R 0 5 0 0 Updated May 26, 2021
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