Snakemake: Add support for transform-copy #311
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JosseVanDelm
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jorendumoulin
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Dec 19, 2024
| @@ -16,8 +16,8 @@ jobs: | |||
| cache: true | |||
| cache-write: ${{ github.event_name == 'push' && github.ref_name == 'main' }} | |||
| - name: Build and run kernels | |||
| run: pixi run snakemake -k -j `nproc` | |||
| run: pixi run snakemake -k -j `nproc` all | |||
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could we maybe make a pixi task for this such that we can do pixi make? would be convenient
not needed here though, just a thought
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what is a pixi-task? :D
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Runs transform-copy with snakemake instead of makefiles
Awaits #310