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debug CI/CD error
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chunyuma committed Nov 4, 2024
1 parent 8f60fb1 commit b58422f
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions .github/workflows/runTest.yml
Original file line number Diff line number Diff line change
Expand Up @@ -23,10 +23,10 @@ jobs:
- name: install YACHT locally
run: pip install .

- name: List contents of site-packages
- name: List contents of 'yacht' in site-packages
run: |
SITE_PACKAGES=$(python -c "import site; print(site.getsitepackages()[0])")
ls -R $SITE_PACKAGES
ls -R $SITE_PACKAGES/yacht
- name: make training data
run: yacht train --ref_file './tests/testdata/20_genomes_sketches.zip' --ksize 31 --prefix 'gtdb_ani_thresh_0.95' --ani_thresh 0.95 --outdir ./ --force
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