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Mendevar#38

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stroehleina wants to merge 23 commits intomasterMDU-PHL/meningotype:masterfrom mendevarMDU-PHL/meningotype:mendevarCopy head branch name to clipboard

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Commits on Aug 26, 2022

• Initial commit mendevar branch, add mendevar config file

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Commits on Aug 29, 2022

• Implement Vaccine Reactivity Index (MenDeVAR)

  stroehleina

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  a70e097

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• fix mendevar import

  stroehleina

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  9a8542f

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• fix output file header

  stroehleina

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• fix some typos

  stroehleina

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• Define output vars before use

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Commits on Oct 21, 2022

• Simplify MenDeVar integration via API

  stroehleina

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  d886b69

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• Fix PorA split for BAST lookup

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• Update DB files for testing

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Commits on Oct 22, 2022

• Update python-package.yml

  stroehleina

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Commits on Oct 24, 2022

• Edit setup.cfg to incl bumpversion

  stroehleina

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• Bump version 0.9.0

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• Remove mendevar.cfg and some logs/comments

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  0ed895f

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• reconcile local

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  d0fc345

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• Merge branch 'mendevar' of https://github.com/MDU-PHL/meningotype into mendevar

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Commits on Apr 6, 2023

• Update README and only output columns specified via kwargs

  stroehleina

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  0705060

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• Update dependencies

  stroehleina

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  258e837

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• Fix dependency info

  stroehleina

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  573dadb

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• Fix linting errors

  stroehleina

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  dd1a2b4

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• fix subprocess import

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• Update python-package.yml

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Commits on Apr 12, 2023

• Update python-package.yml

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Commits on Jun 9, 2023

• Resolves #40: proper error-handling for subprocs, code cleanup

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