Merge branch 'redcap2reproschema' of https://github.com/yibeichan/rep…

…roschema-py into redcap2reproschema

reproschema/redcap2reproschema.py

@@ -343,6 +343,7 @@ def process_csv(
     os.makedirs(f"{abs_folder_path}/protocols/{protocol_name}", exist_ok=True)
     return datas, order, languages
 
+
 def redcap2reproschema(csv_file, yaml_file, schema_context_url=None):
     """
     Convert a REDCap data dictionary to Reproschema format.
@@ -354,7 +355,7 @@ def redcap2reproschema(csv_file, yaml_file, schema_context_url=None):
 
     # Read the YAML configuration
     with open(yaml_file, "r") as f:
-            protocol = yaml.safe_load(f)
+        protocol = yaml.safe_load(f)
 
     protocol_name = protocol.get("protocol_name")
     protocol_display_name = protocol.get("protocol_display_name")
@@ -363,7 +364,7 @@ def redcap2reproschema(csv_file, yaml_file, schema_context_url=None):
     if not protocol_name:
         raise ValueError("Protocol name not specified in the YAML file.")
 
-    protocol_name = protocol_name.replace(' ', '_')  # Replacing spaces with underscores
+    protocol_name = protocol_name.replace(" ", "_")  # Replacing spaces with underscores
 
     # Check if the directory already exists
     if not os.path.exists(protocol_name):
@@ -478,6 +479,7 @@ def redcap2reproschema(csv_file, yaml_file, schema_context_url=None):
         protocol_visibility_obj,
     )
 
+
 def main():
     parser = argparse.ArgumentParser(
         description="Convert REDCap data dictionary to Reproschema format."
@@ -489,5 +491,6 @@ def main():
     # Call the main conversion function
     redcap2reproschema(args.csv_file, args.yaml_file)
 
+
 if __name__ == "__main__":
     main()