Skip to content

SCARAP v0.3.2

Compare
Choose a tag to compare
@SWittouck SWittouck released this 19 Dec 08:18
· 73 commits to master since this release

This is a small update with some user-friendliness improvements and bug fixes. It may be worth it to update to this version, because SCARAP v0.3.1 couldn't deal with MMseqs2 release 13 (February 24th, 2021).

Features:

  • A folder with fasta files is now allowed as input (as an alternative to a file with paths to individual fasta files).
  • An error is no longer thrown when the detected MMseqs2 version is unknown, and MMseqs2 release 13 is now recognized.
  • SCARAP now checks whether gene names are unique across fasta files.

Bug fixes:

  • Fasta headers without spaces no longer result in an error.
  • Having zero splitable superfamilies no longer results in an error.
  • Gene identifiers with "|" are now dealt with correctly.