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Invasive and non-invasive casual evidence of amygdala engagement by DLPFC stimulation

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Xianqing98/DLPFC-amygdala

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Folders overview

  • [Jeff_scripts] - All scripts shared by Jeff Wang.

  • [Plot.R] - R scripts used for plotting the R01 prelim figures

  • [Preprocess.m] - Matlab scripts used for R01 prelim iEEG data preprocessing. Most adapted from Jeff's scripts.

  • [Preprocess.xlsx] - Spreadsheets used as queue file in the preprocessing pipeline (see notes for .m scripts below).

  • [Statistics.R] - R scripts for prelim statistical analyses.

Scripts in [Preprocess.m]

  • LL_Process_NLX_Files.m/LL_Process_NLX_Files_esTT.m - Uses LL_Process_Queue.xlsx in [Preprocess.xlsx] to pull nlx files and do filtering, artifact rejection, etc. and convert everything to MATLAB formats.

  • LL_Fix_Trigs.m - splits triggers into sham vs TMS trials, does channel rejection, etc. Uses LL_FixTrigs_Queue.xlsx in [Preprocess.xlsx] to queue up files.

  • LL_epoch_trials.m - does detrending and epochs the time trace based on trigger times. Uses LL_Epoch_Queue.xlsx in [Preprocess.xlsx].

  • LL_epoch_stats.m - nonparametric clustering to determine significant iTEPs. Uses xl_Epoch_Queue.xlsx in [Preprocess.xlsx].

  • xl_get_iTEPtable.m/xl_get_CCEPtable.m - Export preprocessed iEEG data into .csv format for statistical analyses.

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Invasive and non-invasive casual evidence of amygdala engagement by DLPFC stimulation

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