Merge pull request easybuilders#21417 from ankekreuzer/core-packages-…

…JSC-part8

{lib, data, numlib, tools, math}[GCCcore/13.3.0, foss/2024a, gfbf/2024a] libmad-0.15.1b, SoX-14.4.2,  SuiteSparse-7.8.2, Szip-2.1.1, sympy-1.13.2, trimesh-4.4.9, Voro++-0.4.6, Xerces-C++-3.2.5, zsh-5.9

easybuild/easyconfigs/l/libmad/libmad-0.15.1b-GCCcore-13.3.0.eb

@@ -0,0 +1,27 @@
+easyblock = 'ConfigureMake'
+
+name = 'libmad'
+version = '0.15.1b'
+
+homepage = 'https://www.underbit.com/products/mad/'
+description = """MAD is a high-quality MPEG audio decoder."""
+
+toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
+
+source_urls = ['https://sourceforge.net/projects/mad/files/%(name)s/%(version)s/']
+sources = [SOURCELOWER_TAR_GZ]
+patches = ['libmad-0.15.1b-remove-depreciated-gcc-option.patch']
+checksums = [
+    'bbfac3ed6bfbc2823d3775ebb931087371e142bb0e9bb1bee51a76a6e0078690',  # libmad-0.15.1b.tar.gz
+    # libmad-0.15.1b-remove-depreciated-gcc-option.patch
+    '8f96a23a22ba66e62f32e20064d01f4c7f6a18ba0aab85d3be9ce63794b2c678',
+]
+
+builddependencies = [('binutils', '2.42')]
+
+sanity_check_paths = {
+    'files': ['include/mad.h', 'lib/libmad.a', 'lib/libmad.la', 'lib/libmad.%s' % SHLIB_EXT],
+    'dirs': ['include', 'lib', 'lib64']
+}
+
+moduleclass = 'lib'

easybuild/easyconfigs/s/SoX/SoX-14.4.2-GCCcore-13.3.0.eb

@@ -0,0 +1,34 @@
+easyblock = 'ConfigureMake'
+
+name = 'SoX'
+version = '14.4.2'
+
+homepage = 'http://sox.sourceforge.net/'
+docurls = 'http://sox.sourceforge.net/Docs/Documentation'
+description = """Sound eXchange, the Swiss Army knife of audio manipulation"""
+
+toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
+
+source_urls = [SOURCEFORGE_SOURCE]
+sources = [SOURCELOWER_TAR_GZ]
+checksums = ['b45f598643ffbd8e363ff24d61166ccec4836fea6d3888881b8df53e3bb55f6c']
+
+builddependencies = [('binutils', '2.42')]
+
+dependencies = [
+    ('FLAC', '1.4.3'),
+    ('LAME', '3.100'),
+    ('libmad', '0.15.1b'),
+    ('libvorbis', '1.3.7'),
+    ('FFmpeg', '7.0.2'),
+]
+
+sanity_check_paths = {
+    'files': ['bin/play', 'bin/rec', 'bin/sox', 'bin/soxi', 'include/sox.h',
+              'lib/libsox.la', 'lib/libsox.a', 'lib/pkgconfig/sox.pc', 'lib/libsox.%s' % SHLIB_EXT],
+    'dirs': ['bin', 'include', 'lib', 'lib/pkgconfig', 'share/man'],
+}
+
+sanity_check_commands = ['sox --help']
+
+moduleclass = 'data'

easybuild/easyconfigs/s/SuiteSparse/SuiteSparse-7.8.2-foss-2024a-METIS-5.1.0.eb

@@ -0,0 +1,29 @@
+name = 'SuiteSparse'
+version = '7.8.2'
+local_metis_ver = '5.1.0'
+versionsuffix = '-METIS-%s' % local_metis_ver
+
+homepage = 'https://faculty.cse.tamu.edu/davis/suitesparse.html'
+description = """SuiteSparse is a collection of libraries to manipulate sparse matrices."""
+
+toolchain = {'name': 'foss', 'version': '2024a'}
+toolchainopts = {'unroll': True, 'pic': True}
+
+source_urls = ['https://github.com/DrTimothyAldenDavis/SuiteSparse/archive']
+sources = ['v%(version)s.tar.gz']
+checksums = ['996c48c87baaeb5fc04bd85c7e66d3651a56fe749c531c60926d75b4db5d2181']
+
+builddependencies = [
+    ('CMake', '3.29.3'),
+    ('M4', '1.4.19'),
+]
+
+dependencies = [
+    ('METIS', local_metis_ver),
+    ('MPFR', '4.2.1'),
+]
+
+# make sure that bin/demo can find libsuitesparseconfig.so.5 during build
+prebuildopts = "export LD_LIBRARY_PATH=%(builddir)s/SuiteSparse-%(version)s/lib:$LD_LIBRARY_PATH && "
+
+moduleclass = 'numlib'

easybuild/easyconfigs/t/trimesh/trimesh-4.4.9-gfbf-2024a.eb

@@ -0,0 +1,33 @@
+easyblock = 'PythonPackage'
+
+name = 'trimesh'
+version = '4.4.9'
+
+homepage = 'https://trimsh.org/'
+description = """Trimesh is a Python (2.7- 3.3+) library for loading and using triangular meshes with an emphasis on
+watertight meshes. The goal of the library is to provide a fully featured Trimesh object which allows for easy
+manipulation and analysis, in the style of the excellent Polygon object in the Shapely library."""
+
+
+toolchain = {'name': 'gfbf', 'version': '2024a'}
+
+sources = [SOURCE_TAR_GZ]
+checksums = ['e9f54cb4ef70f9db49446cad3845b7a8043fc7d62d9192b241741f3fb0d813ac']
+
+use_pip = True
+download_dep_fail = True
+sanity_pip_check = True
+
+
+dependencies = [
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),  # numpy required
+]
+
+sanity_check_paths = {
+    'files': [],
+    'dirs': ['lib/python%(pyshortver)s/site-packages'],
+}
+
+
+moduleclass = 'lib'

easybuild/easyconfigs/v/Voro++/Voro++-0.4.6-GCCcore-13.3.0.eb

@@ -0,0 +1,43 @@
+##
+# Author:    Robert Mijakovic <robert.mijakovic@lxp.lu>
+##
+easyblock = 'ConfigureMake'
+
+name = 'Voro++'
+version = '0.4.6'
+
+homepage = 'http://math.lbl.gov/voro++/'
+description = """Voro++ is a software library for carrying out three-dimensional computations of the Voronoi
+tessellation. A distinguishing feature of the Voro++ library is that it carries out cell-based calculations,
+computing the Voronoi cell for each particle individually. It is particularly well-suited for applications that
+rely on cell-based statistics, where features of Voronoi cells (eg. volume, centroid, number of faces) can be used
+to analyze a system of particles."""
+
+toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
+toolchainopts = {'pic': True}
+
+source_urls = [
+    'http://math.lbl.gov/voro++/download/dir/',
+    'https://download.lammps.org/thirdparty',
+]
+sources = [SOURCELOWER_TAR_GZ]
+checksums = ['ef7970071ee2ce3800daa8723649ca069dc4c71cc25f0f7d22552387f3ea437e']
+
+builddependencies = [('binutils', '2.42')]
+
+
+# No configure
+skipsteps = ['configure']
+
+# Override CXX and CFLAGS variables from Makefile
+buildopts = 'CXX="$CXX" CFLAGS="$CXXFLAGS"'
+
+# Override PREFIX variable from Makefile
+installopts = "PREFIX=%(installdir)s"
+
+sanity_check_paths = {
+    'files': ['bin/voro++', 'lib/libvoro++.a', 'include/voro++/voro++.hh'],
+    'dirs': [],
+}
+
+moduleclass = 'math'

easybuild/easyconfigs/x/Xerces-C++/Xerces-C++-3.2.5-GCCcore-13.3.0.eb

@@ -0,0 +1,39 @@
+easyblock = 'CMakeMake'
+
+name = 'Xerces-C++'
+version = '3.2.5'
+
+homepage = 'https://xerces.apache.org/xerces-c/'
+
+description = """Xerces-C++ is a validating XML parser written in a portable
+subset of C++. Xerces-C++ makes it easy to give your application the ability to
+read and write XML data. A shared library is provided for parsing, generating,
+manipulating, and validating XML documents using the DOM, SAX, and SAX2
+APIs."""
+
+toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
+
+source_urls = ['https://archive.apache.org/dist/xerces/c/%(version_major)s/sources/']
+sources = ['xerces-c-%(version)s.tar.gz']
+checksums = ['545cfcce6c4e755207bd1f27e319241e50e37c0c27250f11cda116018f1ef0f5']
+
+builddependencies = [
+    ('pkgconf', '2.2.0'),
+    ('binutils', '2.42'),
+    ('CMake', '3.29.3'),
+]
+
+dependencies = [
+    ('cURL', '8.7.1'),
+]
+
+runtest = 'test'
+
+sanity_check_paths = {
+    'files': ['bin/XInclude',
+              'include/xercesc/xinclude/XIncludeUtils.hpp',
+              'lib/libxerces-c-3.2.%s' % SHLIB_EXT],
+    'dirs': ['bin', 'include', 'lib']
+}
+
+moduleclass = 'lib'

easybuild/easyconfigs/z/zsh/zsh-5.9-GCCcore-13.3.0.eb

@@ -0,0 +1,39 @@
+easyblock = 'ConfigureMake'
+
+name = 'zsh'
+
+version = '5.9'
+
+homepage = 'http://www.zsh.org/'
+description = """
+Zsh is a shell designed for interactive use, although it is also a powerful scripting language.
+"""
+
+toolchain = {'name': 'GCCcore', 'version': '13.3.0'}
+
+source_urls = ['http://prdownloads.sourceforge.net/%(namelower)s']
+sources = [SOURCELOWER_TAR_XZ]
+checksums = ['9b8d1ecedd5b5e81fbf1918e876752a7dd948e05c1a0dba10ab863842d45acd5']
+
+configopts = '--without-tcsetpgrp'
+
+builddependencies = [
+    ('binutils', '2.42'),
+]
+
+dependencies = [
+    ('ncurses', '6.5'),
+]
+
+modextrapaths = {
+    'FPATH': 'share/zsh/%(version)s/functions'
+}
+
+sanity_check_paths = {
+    'files': ['bin/zsh'],
+    'dirs': ['lib/zsh/%(version)s', 'share'],
+}
+
+sanity_check_commands = ['zsh --version']
+
+moduleclass = 'tools'