deploy: 599f6b4

bgruening · Jan 3, 2025 · f6f4d74 · f6f4d74
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diff --git a/README.md b/README.md
@@ -1,9 +1,9 @@
 Documentation
 =============
 
-The documentation is automatically generated when the main [`README.md`](../README.md) is changed on the `master` branch.
+The documentation is automatically generated when the main [`README.md`](https://github.com/bgruening/docker-galaxy/blob/main/README.md) is changed on the `main` branch.
 
-For information, this automatic generation uses the GitHub API (in [`bin/gfm2html`](bin/gfm2html)) and a [Python script](src/generate_html.py) to transform the markdown in the [`README.md`](../README.md) into the HTML files.
-This generation is automatically launched by Travis-CI with [`bin/deploy_docs`](bin/deploy_docs) script.
+For information, this automatic generation uses a [Python script](src/generate_docs.py) to transform the markdown in the `README.md` into the HTML files.
+This generation is automatically launched by a [GitHub Action Workflow](https://github.com/bgruening/docker-galaxy/actions/workflows/update-site.yml).
 
-So, if you see any error in the [online documentation](http://bgruening.github.io/docker-galaxy-stable), you can first check the [`README.md`](../README.md). If the error does not come from the [`README.md`](../README.md), you can either file an issue or check the [Python](src/generate_html.py) or the [bash](bin/gfm2html) scripts used to generate the HTML files.
+So, if you see any error in the [online documentation](http://bgruening.github.io/docker-galaxy), you can first check the `README.md`. If the error does not come from the `README.md`, you can either file an issue or check the [Python](src/generate_docs.py) script used to generate the HTML files.
diff --git a/auto-exec-tools-in-docker.html b/auto-exec-tools-in-docker.html
@@ -121,10 +121,11 @@ <h1>
     </h1>
     <p>
      This is a very cool feature where Galaxy automatically detects that your tool has an associated docker image, pulls it and runs it for you. These images (when available) have been generated using
-     <a href="https://github.com/mulled">
+     <a href="https://docs.galaxyproject.org/en/latest/admin/special_topics/mulled_containers.html">
       mulled
      </a>
-     . To test, install the
+     .
+To test, install the
      <a href="https://toolshed.g2.bx.psu.edu/repository?repository_id=8d84903cc667dbe7&amp;changeset_revision=7b3aaff0d78c">
       IUC bedtools
      </a>

diff --git a/bin/deploy_docs b/bin/deploy_docs
diff --git a/bin/gfm2html b/bin/gfm2html
diff --git a/src/generate_html.py b/src/generate_html.py