Dev #4494
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Dev #4494
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Collaborator
hanars
commented
Nov 21, 2024
hanars
commented
- All unit test are passing and coverage has not substantively dropped
- No new dependency vulnerabilities have been introduced
- Any changes to the docker image have been vetted for potential vulnerabilities
- If any python requirements are updated, they are noted and here and will be updated before deploying:
- Any database migrations are noted here, and will be run before deploying:
- VariantNote report flag
- All major changes are recorded in the changelog, and the changelog has been updated to reflect the latest release
- Any new endpoints are explicitly tested to ensure they are only accessible to correctly permissioned users
- No secrets have been committed
- Any changes to environment variables or secrets are noted here, and will properly configured before deploying:
update VLM to non-conflicting port
* add relatedness check tsv to failure message * Update check_for_new_samples_from_pipeline_tests.py
DB initialization redesign
* add database init to docker compose * ws * move file * exclude paths
* almost working * updates * or_missing * fix sample tracking logic * f string * another pass * minor things * less code * reuse as much code from _annotate_families_inheritance * rstructure passes inheritance field * fix _family_has_valid_inheritance * fix up test cases * oop * typo * typo 2 * PR comments * comments * extra lines
…straint remove mito highConstraintRegion
add human-readable error for misconfigured PDO
…leanup Reference data handler cleanup
Pdo missing project error
…ants Fix multi data type comp het bug
Bumps [aiohttp](https://github.com/aio-libs/aiohttp) from 3.10.2 to 3.10.11. - [Release notes](https://github.com/aio-libs/aiohttp/releases) - [Changelog](https://github.com/aio-libs/aiohttp/blob/master/CHANGES.rst) - [Commits](aio-libs/aiohttp@v3.10.2...v3.10.11) --- updated-dependencies: - dependency-name: aiohttp dependency-type: indirect ... Signed-off-by: dependabot[bot] <support@github.com>
…ch/aiohttp-3.10.11 Bump aiohttp from 3.10.2 to 3.10.11 in /hail_search
…ect-loading Anvil allow partial project loading
Better gregor missing airtable warnings
Report variant note
Local no analyst UI
explicitly set PDO status for sex/relatedness PDOs
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