Skip to content

Commit

Permalink
build based on 2f8c94f
Browse files Browse the repository at this point in the history
  • Loading branch information
Documenter.jl committed Jul 3, 2024
1 parent d375160 commit 65b0ec0
Show file tree
Hide file tree
Showing 9 changed files with 10 additions and 10 deletions.
2 changes: 1 addition & 1 deletion dev/.documenter-siteinfo.json
View file
Original file line number Diff line number Diff line change
@@ -1 +1 @@
{"documenter":{"julia_version":"1.10.4","generation_timestamp":"2024-07-03T15:49:41","documenter_version":"1.5.0"}}
{"documenter":{"julia_version":"1.10.4","generation_timestamp":"2024-07-03T16:58:01","documenter_version":"1.5.0"}}
6 changes: 3 additions & 3 deletions dev/api/index.html
View file

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion dev/index.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -41,4 +41,4 @@
version = {v0.3.0},
year = {2024},
month = {04}
}</code></pre></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="naivefinder/">Finding ORFs »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 15:49">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
}</code></pre></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="naivefinder/">Finding ORFs »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 16:58">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion dev/iodocs/index.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -31,4 +31,4 @@
&gt;seq id=11 start=581 stop=601 strand=+ frame=2 score=0.0
ATGTGTCCAACGGCAGCCTGA
&gt;seq id=12 start=695 stop=706 strand=+ frame=2 score=0.0
ATGCAACCCTGA</code></pre><p>This could also be done to writting a <code>FASTA</code> file with the nucleotide sequences of the ORFs using the <code>write_orfs_fna</code> function. Similarly for the <code>BED</code> and <code>GFF</code> files using the <code>write_orfs_bed</code> and <code>write_orfs_gff</code> functions respectively.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../simplecodingrule/">« A Simple Coding Rule</a><a class="docs-footer-nextpage" href="../api/">API »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 15:49">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
ATGCAACCCTGA</code></pre><p>This could also be done to writting a <code>FASTA</code> file with the nucleotide sequences of the ORFs using the <code>write_orfs_fna</code> function. Similarly for the <code>BED</code> and <code>GFF</code> files using the <code>write_orfs_bed</code> and <code>write_orfs_gff</code> functions respectively.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../simplecodingrule/">« A Simple Coding Rule</a><a class="docs-footer-nextpage" href="../api/">API »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 16:58">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion dev/naivefinder/index.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -57,4 +57,4 @@
MSPHKAM*
M*
MCPTAA*
MQP*</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../">« Home</a><a class="docs-footer-nextpage" href="../simplecodingrule/">A Simple Coding Rule »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 15:49">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
MQP*</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../">« Home</a><a class="docs-footer-nextpage" href="../simplecodingrule/">A Simple Coding Rule »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 16:58">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
Binary file modified dev/objects.inv
View file
Binary file not shown.
2 changes: 1 addition & 1 deletion dev/roadmap/index.html
View file

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion dev/search_index.js
View file

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion dev/simplecodingrule/index.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -130,4 +130,4 @@
ORF{NaiveFinder}(4540:4644, &#39;+&#39;, 1)
ORF{NaiveFinder}(4690:4866, &#39;+&#39;, 1)
ORF{NaiveFinder}(4741:4866, &#39;+&#39;, 1)
ORF{NaiveFinder}(4744:4866, &#39;+&#39;, 1)</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../naivefinder/">« Finding ORFs</a><a class="docs-footer-nextpage" href="../iodocs/">Wrtiting ORFs In Files »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 15:49">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
ORF{NaiveFinder}(4744:4866, &#39;+&#39;, 1)</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../naivefinder/">« Finding ORFs</a><a class="docs-footer-nextpage" href="../iodocs/">Wrtiting ORFs In Files »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Wednesday 3 July 2024 16:58">Wednesday 3 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

0 comments on commit 65b0ec0

Please sign in to comment.