Patch transient CI failures due to busy file system #987
Workflow file for this run
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| name: CI for Autotools/Linux | |
| on: | |
| push: | |
| paths-ignore: | |
| - "**/CMakeLists.txt" | |
| - "**.cmake" | |
| - "**.cmake.in" | |
| - "cmake/**" | |
| - "CMake*" | |
| - ".github/workflows/ci_cmake.yml" | |
| - ".github/workflows/ci_darwin.yml" | |
| - ".github/workflows/composite-cmake/**" | |
| pull_request: | |
| env: | |
| # Due to busy file system problems on the CI runners, we introduced a patch to | |
| # sleep if the MPI count of an I/O operation is unexpectedly 0 and then retry | |
| # the I/O operation once. The time is in milliseconds. | |
| IO_SLEEP_TIME: 5 | |
| jobs: | |
| linux-multi: | |
| runs-on: ubuntu-latest | |
| name: Autotools build on Linux | |
| steps: | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update -yq | |
| sudo apt-get install -yq --no-install-recommends \ | |
| zlib1g-dev libmpich-dev mpich | |
| - name: Checkout source code | |
| uses: actions/checkout@main | |
| - name: Patch I/O for CI by sleeping if I/O intensity is too high | |
| run: git apply doc/patch/patch-CI-IO.patch | |
| - name: Run bootstrap script | |
| run: ./bootstrap | |
| - name: Make check with MPI and debug, without shared | |
| shell: bash | |
| run: | | |
| DIR="checkMPIdebug_shared" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure --enable-mpi --enable-debug --disable-shared \ | |
| CFLAGS="-O0 -g -Wall -Wextra -Wno-unused-parameter" \ | |
| CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j V=0 | |
| make -j check V=0 | |
| - name: Make check with MPI, without debug | |
| shell: bash | |
| run: | | |
| DIR="checkMPI" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure --enable-mpi CFLAGS="-O2" \ | |
| CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j V=0 | |
| make -j check V=0 | |
| - name: Make check without MPI, with debug | |
| shell: bash | |
| run: | | |
| DIR="checkdebug" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure --enable-debug CFLAGS="-O0 -g -Wall -Wno-uninitialized" \ | |
| CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j V=0 | |
| make -j check V=0 | |
| - name: Install JSON parser library halfway through CI run | |
| run: | | |
| sudo apt-get install -yq --no-install-recommends \ | |
| libjansson-dev | |
| - name: Make check with MPI, debug and C++ compiler | |
| shell: bash | |
| run: | | |
| DIR="checkMPIdebugCXX" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure --enable-mpi --enable-debug CFLAGS="-O0" CC=mpicxx \ | |
| CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j V=0 | |
| make -j check V=0 | |
| - name: Make check with OpenMP, MPI, debug | |
| shell: bash | |
| run: | | |
| DIR="checkOpenMPMPIdebug" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure --enable-openmp="-fopenmp" --enable-mpi \ | |
| --enable-debug CFLAGS="-O0" \ | |
| CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j V=0 | |
| make -j check V=0 | |
| - name: Make distcheck | |
| shell: bash | |
| run: | | |
| DIR="distcheck" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j distcheck V=0 | |
| - name: Upload log files | |
| if: always() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: linux_multi_log | |
| path: | | |
| ./**/config.log | |
| ./**/test-suite.log | |
| ./**/test/*.log | |
| linux-valgrind: | |
| runs-on: ubuntu-latest | |
| name: Autotools with valgrind | |
| steps: | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update -yq | |
| sudo apt-get install -yq --no-install-recommends \ | |
| zlib1g-dev libmpich-dev mpich valgrind | |
| - name: Checkout source code | |
| uses: actions/checkout@main | |
| - name: Patch I/O for CI by sleeping if I/O intensity is too high | |
| run: git apply doc/patch/patch-CI-IO.patch | |
| - name: Run bootstrap script | |
| run: ./bootstrap | |
| - name: Make check with MPI, debug and valgrind, without shared | |
| shell: bash | |
| run: | | |
| DIR="checkMPIdebug_valgrind" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure --enable-mpi --enable-debug \ | |
| --disable-shared --enable-valgrind \ | |
| CFLAGS="-O0 -g -Wall -Wextra -Wno-unused-parameter" \ | |
| CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j V=0 | |
| make -j check V=0 | |
| - name: Upload log files | |
| if: always() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: linux_valgrind_log | |
| path: | | |
| ./**/config.log | |
| ./**/test-suite.log | |
| ./**/test/*.log | |
| linux-tarball: | |
| runs-on: ubuntu-latest | |
| name: Pack tarball on Linux | |
| steps: | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update -yq | |
| sudo apt-get install -yq --no-install-recommends \ | |
| zlib1g-dev libmpich-dev mpich | |
| - name: Checkout source code | |
| uses: actions/checkout@main | |
| with: | |
| fetch-depth: 0 | |
| - name: Patch I/O for CI by sleeping if I/O intensity is too high | |
| run: git apply doc/patch/patch-CI-IO.patch | |
| - name: Identify version | |
| shell: bash | |
| run: | | |
| git tag | |
| git describe --abbrev=4 --match 'v*' | |
| - name: Run bootstrap script | |
| run: ./bootstrap | |
| - name: Configure and make | |
| shell: bash | |
| run: | | |
| DIR="tarball" && mkdir -p "$DIR" && cd "$DIR" | |
| ../configure --enable-mpi --enable-debug \ | |
| CFLAGS="-O0 -g -pedantic -Wall -Wextra -Werror \ | |
| -Wno-unused-parameter -Wno-builtin-declaration-mismatch \ | |
| -Wno-implicit-fallthrough" \ | |
| CPPFLAGS="-DSC_HACK_MPI_SLEEP=$IO_SLEEP_TIME" | |
| make -j V=0 | |
| make -j check V=0 | |
| make -j distcheck V=0 | |
| mv libsc-*.tar.gz .. | |
| - name: Upload tarball | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: libsc_tarball | |
| path: ./libsc-*.tar.gz | |
| - name: Upload log files | |
| if: always() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: linux_tarball_log | |
| path: | | |
| ./**/config.log | |
| ./**/test-suite.log | |
| ./**/test/*.log |