Update some dependencies and allow compatible versions

requirements.txt

@@ -1,15 +1,15 @@
-Owlready2==0.40
-argparse==1.4.0
-pandas==1.5.3
-numpy==1.24.2
-gensim==4.3.0
-scipy==1.10.1
-scikit-learn==1.2.1
-setuptools==67.6.0
-requests==2.28.2
-tqdm==4.65.0
-sparse_dot_topn==0.3.4
-bioregistry==0.6.92
-nltk==3.8.1
-rapidfuzz==2.13.7
-shortuuid==1.0.11
+Owlready2~=0.44
+argparse~=1.4.0
+pandas~=2.0.3
+numpy~=1.24.2
+gensim~=4.3.0
+scipy~=1.10.1
+scikit-learn~=1.2.1
+setuptools~=67.6.0
+requests~=2.31.0
+tqdm~=4.66.1
+sparse_dot_topn~=0.3.4
+bioregistry~=0.10.6
+nltk~=3.8.1
+rapidfuzz~=2.13.7
+shortuuid~=1.0.11