CNPHI Laser dropping provenance column

cidgoh · Nov 10, 2020 · 42bb495 · 42bb495
1 parent 599c30c
commit 42bb495
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Showing 4 changed files with 3 additions and 8 deletions.
diff --git a/script/main.js b/script/main.js
@@ -11,7 +11,7 @@
  * main.html?template=test_template
  *
  */
-const VERSION = '0.13.4'; //Version 0.13.4
+const VERSION = '0.13.5';
 const TEMPLATES = {
   'CanCOGeN Covid-19': {'folder': 'canada_covid19', 'status': 'published'},
   'PHAC Dexa (ALPHA)': {'folder': 'phac_dexa', 'status': 'draft'},

diff --git a/template/canada_covid19/data.js b/template/canada_covid19/data.js
@@ -3519,11 +3519,6 @@ var DATA = [
             {
               "field": "DataHarmonizer provenance"
             }
-          ],
-          "CNPHI": [
-            {
-              "field": "DataHarmonizer provenance"
-            }
           ]
         }
       }

diff --git a/template/canada_covid19/data.tsv b/template/canada_covid19/data.tsv
@@ -121,7 +121,7 @@ Risk Factor: A variable associated with an increased risk of disease or infectio
 	Pathogen diagnostic testing	diagnostic pcr Ct value 2	xs:token							The Ct value result from a diagnostic SARS-CoV-2 RT-PCR test.	Provide the CT value of the sample from the second diagnostic RT-PCR test.	36		Gene Target #2 CT Value
 		Contributor acknowledgement												
 	Contributor acknowledgement	authors	xs:token			recommended				Names of individuals contributing to the processes of sample collection, sequence generation, analysis, and data submission.	Include the first and last names of all individuals that should be attributed, separated by a comma.	Tejinder Singh, Fei Hu, Joe Blogs	Authors	
-	Contributor acknowledgement	DataHarmonizer provenance	provenance										DataHarmonizer provenance	DataHarmonizer provenance
+	Contributor acknowledgement	DataHarmonizer provenance	provenance										DataHarmonizer provenance	
 
 
 	umbrella bioproject accession	PRJNA623807												

diff --git a/template/canada_covid19/export.js b/template/canada_covid19/export.js
@@ -176,7 +176,7 @@ var exportLASER = (baseName, hot, data, xlsx, fileType) => {
     ['Gene Target #1 CT Value',[]],
     ['Gene Target #2',[]],
     ['Gene Target #2 CT Value',[]],
-    ['DataHarmonizer provenance',[]]
+    //['DataHarmonizer provenance',[]]
   ]);
 
   const sourceFields = getFields(data);
-Original file line number
+Diff line change
@@ Expand Up / @@ -3519,11 +3519,6 @@ var DATA = [ @@
                 {
                   "field": "DataHarmonizer provenance"
                 }
-              ],
-              "CNPHI": [
-                {
-                  "field": "DataHarmonizer provenance"
-                }
               ]
             }
           }
@@ Expand Down @@