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Add DOID ID to disease for SCVCEPs in GPM #140

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@yugen yugen commented Jan 4, 2025

SC-VCEPS want to use DOID IDs to identify diseases in the GPM. The GPM depends on the GT's snapshot of MonDO to look up diseases. This PR adds doid_id to the Disease model and updates the OboParser to get them from mondo terms in the OBO file.

See clingen-data-model/gpm#101 for the GPM PR that depends on this change.

@yugen yugen force-pushed the add-doid-id-to-disease branch from 4d1096b to 822b10b Compare January 4, 2025 23:05
@yugen yugen changed the title Ignore terms that don't have a MONDO id. Add DOID ID to disease for SCVCEPs in GPM Jan 4, 2025
@yugen yugen marked this pull request as draft January 4, 2025 23:07
@yugen yugen marked this pull request as ready for review January 13, 2025 20:28
@yugen yugen requested a review from bpow January 13, 2025 20:28
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