GitHub - cooljeanius/gcta: Fork/copy of a project some user wanted to see added to MacPorts. With included Eigen headers (well, some of them, at least).

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Fork/copy of a project some user wanted to see added to MacPorts. With included Eigen headers (well, some of them, at least).

web.archive.org/web/20160317052613/http://cnsgenomics.com/software/gcta/download.html

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Name		Name	Last commit message	Last commit date
Latest commit History 61 Commits
.github		.github
build-aux		build-aux
eigen		eigen
m4		m4
.gitattributes		.gitattributes
.gitignore		.gitignore
AUTHORS		AUTHORS
COPYING		COPYING
COPYING.txt		COPYING.txt
ChangeLog		ChangeLog
CommFunc.cpp		CommFunc.cpp
CommFunc.h		CommFunc.h
INSTALL		INSTALL
Makefile.am		Makefile.am
Makefile.in		Makefile.in
Makefile_bak		Makefile_bak
Makefile_orig.in		Makefile_orig.in
NEWS		NEWS
README		README
README.txt		README.txt
StatFunc.cpp		StatFunc.cpp
StatFunc.h		StatFunc.h
StrFunc.cpp		StrFunc.cpp
StrFunc.h		StrFunc.h
aclocal.m4		aclocal.m4
cdflib.h		cdflib.h
config.h.in		config.h.in
configure		configure
configure.ac		configure.ac
configure.scan		configure.scan
data.cpp		data.cpp
dcdflib.cpp		dcdflib.cpp
dcdflib.h		dcdflib.h
est_hsq.cpp		est_hsq.cpp
gcta.h		gcta.h
grm.cpp		grm.cpp
gwas_simu.cpp		gwas_simu.cpp
ipmpar.h		ipmpar.h
ld.cpp		ld.cpp
option.cpp		option.cpp
raw_geno.cpp		raw_geno.cpp
zfstream.cpp		zfstream.cpp
zfstream.h		zfstream.h

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PROGRAM: GCTA

DESCRIPTION: Genome-wide Complex Trait Analysis

AUTHOR: Jian Yang, Hong Lee, Mike Goddard and Peter Visscher

CONTACT: jian.yang@uq.edu.au

YEAR: 2009-2011

LICENSE: Released under GNU General Public License, v2 (see COPYING.txt)

DOCUMENTATION: http://gump.qimr.edu.au/gcta/

WEBSITE/ORIGINAL SOURCE: http://web.archive.org/web/20160317052613/http://cnsgenomics.com/software/gcta/download.html

LIBRARY: require the library EIGEN (version 3.0.3) support (see http://eigen.tuxfamily.org/). You will need to specify the path of library EIGEN in the Makefile (keyword EigenLib).


COMPILATION: You will need a standard C/C++ compiler such as GNU gcc and type

make -f Makefile

(at least, that was the original compilation process; this fork is an attempt
to autotools-ize the build process...)

OTHER NOTES: If you are viewing this on GitHub, these are not the original GCTA
sources. This fork is just a random person messing around with it in the process
of attempting to package it for a package manager.