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Update README.md
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dorianps authored Apr 9, 2017
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Expand Up @@ -90,7 +90,7 @@ __Lesion_in_MNI.nii.gz__ - Lesion mask in MNI space
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**Important Note**
MNI is a space, not a template. There are many templates in MNI space, most of which do not have the same gyri or sulci at the same coordinates. LINDA uses the CH2 template. If you use another template to overlay results, or to make other comparisons, the results will be wrong, even though both might be in MNI space. You have to use the CH2 template to see LINDA results. Or you can register the CH2 template to another template (i.e., ICBM 2009a) and than move back and forth as necessary.
MNI is a space, not a template. There are many templates in MNI space, most of which do not have the same gyri or sulci at the same coordinates. LINDA uses the CH2 template which is included in LINDA. Please don't use other MNI templates to overlay results. They may look good from a first look, but they will be wrong. Use the CH2 template that comes with LINDA. In alternative, you can register the CH2 template to another template (i.e., ICBM 2009a) and transform back and forth the results as necessary.

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## Frequently Asked Questions
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