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Merge branch 'master' of https://github.com/edmcouncil/idmp into IDMP…
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…-535

Signed-off-by: Elisa Kendall <ekendall@thematix.com>

# Conflicts:
#	AboutIDMPDev-ReferenceIndividuals.rdf
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ElisaKendall committed Sep 25, 2023
2 parents 27aa65b + 21fd69e commit 352201c
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1 change: 1 addition & 0 deletions AboutIDMPDev-ReferenceIndividuals.rdf
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<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/NorthAmericanRegistrationAuthorities/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/NorthAmericanRegulatoryAgencies/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/PublicHealthInformationNetwork/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11239-PharmaceuticalDoseForms/"/>
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3 changes: 2 additions & 1 deletion AboutIDMPDev.rdf
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Expand Up @@ -110,6 +110,7 @@
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/NorthAmericanRegulatoryAgencies/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/CommonTerminologyCriteriaForAdverseEvents/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/PublicHealthInformationNetwork/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-RegistrationAuthorities/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11238-Substances/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11239-PharmaceuticalDoseForms/"/>
Expand All @@ -118,7 +119,7 @@
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11616-PharmaceuticalProducts/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO21090-HarmonizedDatatypes/"/>

<owl:versionIRI rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/20230801/AboutIDMPDev/"/>
<owl:versionIRI rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/20230901/AboutIDMPDev/"/>
</owl:Ontology>

</rdf:RDF>
6 changes: 3 additions & 3 deletions ISO/ISO11615-MedicinalProducts.rdf
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Expand Up @@ -2626,7 +2626,7 @@ g) therapeutic indication(s) as authorized for the medicinal product.</skos:note
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="&idmp-mprd;hasShelfLifeTimePeriod"/>
<owl:someValuesFrom rdf:resource="&cmns-dt;DatePeriod"/>
<owl:someValuesFrom rdf:resource="&cmns-dt;Duration"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
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</owl:ObjectProperty>

<owl:ObjectProperty rdf:about="&idmp-mprd;hasShelfLifeTimePeriod">
<rdfs:subPropertyOf rdf:resource="&cmns-dt;hasDatePeriod"/>
<rdfs:subPropertyOf rdf:resource="&cmns-dt;hasDuration"/>
<rdfs:label>has shelf life time period</rdfs:label>
<dct:source>ISO 11615:2017 Health informatics - Identification of medicinal products (IDMP) - Data elements and structures for the unique identification and exchange of regulated medicinal product information, Figure 11 and clause 9.6.2.11</dct:source>
<rdfs:domain rdf:resource="&idmp-mprd;ShelfLife"/>
<rdfs:range rdf:resource="&cmns-dt;DatePeriod"/>
<rdfs:range rdf:resource="&cmns-dt;Duration"/>
<skos:definition>period during which a medicinal product retains its properties and stated performance within specified limits if stored under defined conditions</skos:definition>
<idmp-sub:hasConformanceLevel rdf:resource="&idmp-sub;ConformanceLevel-Mandatory"/>
<idmp-dtp:isEncodedAs rdf:resource="&idmp-dtp;DatatypeCode-PQ"/>
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188 changes: 188 additions & 0 deletions ISO/ISO5218-RepresentationOfHumanSexes.rdf
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<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE rdf:RDF [
<!ENTITY cmns-av "https://www.omg.org/spec/Commons/AnnotationVocabulary/">
<!ENTITY cmns-cds "https://www.omg.org/spec/Commons/CodesAndCodeSets/">
<!ENTITY cmns-cls "https://www.omg.org/spec/Commons/Classifiers/">
<!ENTITY cmns-col "https://www.omg.org/spec/Commons/Collections/">
<!ENTITY cmns-cxtdsg "https://www.omg.org/spec/Commons/ContextualDesignators/">
<!ENTITY cmns-dsg "https://www.omg.org/spec/Commons/Designators/">
<!ENTITY cmns-txt "https://www.omg.org/spec/Commons/TextDatatype/">
<!ENTITY dct "http://purl.org/dc/terms/">
<!ENTITY idmp-chg "https://spec.pistoiaalliance.org/idmp/ontology/META/ChangeManagement/">
<!ENTITY idmp-dtp "https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO21090-HarmonizedDatatypes/">
<!ENTITY idmp-sex "https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/">
<!ENTITY mvf "https://www.omg.org/spec/MVF/MultipleVocabularyFacility/">
<!ENTITY owl "http://www.w3.org/2002/07/owl#">
<!ENTITY rdf "http://www.w3.org/1999/02/22-rdf-syntax-ns#">
<!ENTITY rdfs "http://www.w3.org/2000/01/rdf-schema#">
<!ENTITY skos "http://www.w3.org/2004/02/skos/core#">
<!ENTITY xsd "http://www.w3.org/2001/XMLSchema#">
]>
<rdf:RDF xml:base="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/"
xmlns:cmns-av="https://www.omg.org/spec/Commons/AnnotationVocabulary/"
xmlns:cmns-cds="https://www.omg.org/spec/Commons/CodesAndCodeSets/"
xmlns:cmns-cls="https://www.omg.org/spec/Commons/Classifiers/"
xmlns:cmns-col="https://www.omg.org/spec/Commons/Collections/"
xmlns:cmns-cxtdsg="https://www.omg.org/spec/Commons/ContextualDesignators/"
xmlns:cmns-dsg="https://www.omg.org/spec/Commons/Designators/"
xmlns:cmns-txt="https://www.omg.org/spec/Commons/TextDatatype/"
xmlns:dct="http://purl.org/dc/terms/"
xmlns:idmp-chg="https://spec.pistoiaalliance.org/idmp/ontology/META/ChangeManagement/"
xmlns:idmp-dtp="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO21090-HarmonizedDatatypes/"
xmlns:idmp-sex="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/"
xmlns:mvf="https://www.omg.org/spec/MVF/MultipleVocabularyFacility/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:skos="http://www.w3.org/2004/02/skos/core#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#">

<owl:Ontology rdf:about="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/">
<rdfs:label>ISO 5218 Codes for the Representation of Human Sexes Ontology</rdfs:label>
<dct:abstract>The ISO 5218 Codes for the representation of human sexes ontology provides code elements for either the representation of human sexes or the availability of such information. Note that the number of options available in this standard is does not reflect current viewpoints, but is referenced explicitly in the IDMP standards, and follows the agreements made among members of the working group that produced the specification. For more general medical use and based on best practices, consideration should be given to selecting a set of possible values that is more representative and inclusive.</dct:abstract>
<dct:license rdf:datatype="&xsd;anyURI">https://opensource.org/licenses/MIT</dct:license>
<dct:source>ISO/IEC 5218 - Information technology - Codes for the representation of human sexes, Second edition, 2022-06</dct:source>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO21090-HarmonizedDatatypes/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/META/ChangeManagement/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/Commons/AnnotationVocabulary/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/Commons/Classifiers/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/Commons/CodesAndCodeSets/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/Commons/Collections/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/Commons/ContextualDesignators/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/Commons/Designators/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/Commons/TextDatatype/"/>
<owl:imports rdf:resource="https://www.omg.org/spec/MVF/MultipleVocabularyFacility/"/>
<owl:versionIRI rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/20230901/ISO5218-RepresentationOfHumanSexes/"/>
<idmp-chg:hasMaturityLevel rdf:resource="&idmp-chg;Provisional"/>
<cmns-av:copyright>Copyright (c) 2022-2023 EDM Council, Inc.</cmns-av:copyright>
<cmns-av:copyright>Copyright (c) 2022-2023 Pistoia Alliance, Inc.</cmns-av:copyright>
</owl:Ontology>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-Female">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSex"/>
<rdfs:label>ISO 5218 - Female</rdfs:label>
<skos:definition>concept descriptor indicating that the human sex is female</skos:definition>
<skos:note>this concept is a classifier for humans based on their sex being female</skos:note>
<idmp-dtp:hasDisplayName>Female</idmp-dtp:hasDisplayName>
<cmns-dsg:hasName rdf:resource="&idmp-sex;ISO5218-Female-Name"/>
<cmns-txt:hasTextValue>2</cmns-txt:hasTextValue>
</owl:NamedIndividual>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-Female-Name">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSexName"/>
<rdfs:label>ISO 5218 - Female - name</rdfs:label>
<cmns-dsg:isNameOf rdf:resource="&idmp-sex;ISO5218-Female"/>
<mvf:hasTextualName>Female</mvf:hasTextualName>
<mvf:isPreferred rdf:datatype="&xsd;boolean">true</mvf:isPreferred>
</owl:NamedIndividual>

<owl:Class rdf:about="&idmp-sex;ISO5218-HumanSex">
<rdfs:subClassOf rdf:resource="&idmp-dtp;ISO21090-ConceptDescriptor"/>
<rdfs:subClassOf rdf:resource="&cmns-cls;Classifier"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="&cmns-col;isIncludedIn"/>
<owl:hasValue rdf:resource="&idmp-sex;ISO5218-HumanSexVocabulary"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:label>ISO 5218 - human sex</rdfs:label>
<owl:equivalentClass>
<owl:Class>
<owl:oneOf rdf:parseType="Collection">
<rdf:Description rdf:about="&idmp-sex;ISO5218-Female">
</rdf:Description>
<rdf:Description rdf:about="&idmp-sex;ISO5218-Male">
</rdf:Description>
<rdf:Description rdf:about="&idmp-sex;ISO5218-NotApplicable">
</rdf:Description>
<rdf:Description rdf:about="&idmp-sex;ISO5218-NotKnown">
</rdf:Description>
</owl:oneOf>
</owl:Class>
</owl:equivalentClass>
<skos:definition>concept descriptor and code for the classification of human sex or the availability of information about it</skos:definition>
<skos:note>Human sex is represented by a one-character numeric code.</skos:note>
<cmns-av:adaptedFrom>ISO/IEC 5218 - Information technology - Codes for the representation of human sexes, Second edition, 2022-06, clause 4</cmns-av:adaptedFrom>
</owl:Class>

<owl:Class rdf:about="&idmp-sex;ISO5218-HumanSexName">
<rdfs:subClassOf rdf:resource="&cmns-cxtdsg;ContextualName"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="&cmns-col;isIncludedIn"/>
<owl:hasValue rdf:resource="&idmp-sex;ISO5218-HumanSexVocabulary"/>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="&cmns-dsg;isNameOf"/>
<owl:onClass rdf:resource="&idmp-sex;ISO5218-HumanSex"/>
<owl:qualifiedCardinality rdf:datatype="&xsd;nonNegativeInteger">1</owl:qualifiedCardinality>
</owl:Restriction>
</rdfs:subClassOf>
<rdfs:label>ISO 5218 - human sex name</rdfs:label>
<skos:definition>concept descriptor name for the classification of human sex or the availability of information about it</skos:definition>
<cmns-av:adaptedFrom>ISO/IEC 5218 - Information technology - Codes for the representation of human sexes, Second edition, 2022-06, clause 4</cmns-av:adaptedFrom>
</owl:Class>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-HumanSexVocabulary">
<rdf:type rdf:resource="&idmp-dtp;ControlledVocabulary"/>
<rdf:type rdf:resource="&cmns-cls;ClassificationScheme"/>
<rdf:type rdf:resource="&cmns-cds;CodeSet"/>
<rdfs:label>ISO 5218 human sex vocabulary</rdfs:label>
<skos:definition>controlled vocabulary defining codes for the representation fo human sex according to ISO 5218 standard</skos:definition>
<cmns-av:adaptedFrom>ISO/IEC 5218 - Information technology - Codes for the representation of human sexes, Second edition, 2022-06, clause 4</cmns-av:adaptedFrom>
</owl:NamedIndividual>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-Male">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSex"/>
<rdfs:label>ISO 5218 - Male</rdfs:label>
<skos:definition>concept descriptor indicating that the human sex is male</skos:definition>
<idmp-dtp:hasDisplayName>Male</idmp-dtp:hasDisplayName>
<cmns-dsg:hasName rdf:resource="&idmp-sex;ISO5218-Male-Name"/>
<cmns-txt:hasTextValue>1</cmns-txt:hasTextValue>
</owl:NamedIndividual>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-Male-Name">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSexName"/>
<rdfs:label>ISO 5218 - Male name</rdfs:label>
<cmns-dsg:isNameOf rdf:resource="&idmp-sex;ISO5218-Male"/>
<mvf:hasTextualName>Male</mvf:hasTextualName>
<mvf:isPreferred rdf:datatype="&xsd;boolean">true</mvf:isPreferred>
</owl:NamedIndividual>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-NotApplicable">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSex"/>
<rdfs:label>ISO 5218 - Not applicable</rdfs:label>
<skos:definition>concept descriptor indicating that the value for human sex is not applicable in the context that the concept is used</skos:definition>
<idmp-dtp:hasDisplayName>Not applicable</idmp-dtp:hasDisplayName>
<cmns-dsg:hasName rdf:resource="&idmp-sex;ISO5218-NotApplicable-Name"/>
<cmns-txt:hasTextValue>9</cmns-txt:hasTextValue>
</owl:NamedIndividual>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-NotApplicable-Name">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSexName"/>
<rdfs:label>ISO 5218 - Not applicable name</rdfs:label>
<cmns-dsg:isNameOf rdf:resource="&idmp-sex;ISO5218-NotApplicable"/>
<mvf:hasTextualName>Not applicable</mvf:hasTextualName>
<mvf:isPreferred rdf:datatype="&xsd;boolean">true</mvf:isPreferred>
</owl:NamedIndividual>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-NotKnown">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSex"/>
<rdfs:label>ISO 5218 - Not known</rdfs:label>
<skos:definition>concept descriptor indicating that the human sex is not known in the context that the concept is used</skos:definition>
<idmp-dtp:hasDisplayName>Not known</idmp-dtp:hasDisplayName>
<cmns-dsg:hasName rdf:resource="&idmp-sex;ISO5218-NotKnown-Name"/>
<cmns-txt:hasTextValue>0</cmns-txt:hasTextValue>
</owl:NamedIndividual>

<owl:NamedIndividual rdf:about="&idmp-sex;ISO5218-NotKnown-Name">
<rdf:type rdf:resource="&idmp-sex;ISO5218-HumanSexName"/>
<rdfs:label>ISO 5218 - Not known name</rdfs:label>
<cmns-dsg:isNameOf rdf:resource="&idmp-sex;ISO5218-NotKnown"/>
<mvf:hasTextualName>Not known</mvf:hasTextualName>
<mvf:isPreferred rdf:datatype="&xsd;boolean">true</mvf:isPreferred>
</owl:NamedIndividual>

</rdf:RDF>
2 changes: 1 addition & 1 deletion ISO/MedicalDictionaryForRegulatoryActivities.rdf
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Expand Up @@ -393,7 +393,7 @@

<owl:NamedIndividual rdf:about="&idmp-meddra;OID-2.16.840.1.113883.6.163">
<rdf:type rdf:resource="&idmp-dtp;ObjectIdentifier"/>
<rdf:type rdf:resource="&cmns-id;RegisteredIdentifier"/>
<rdf:type rdf:resource="&cmns-ra;RegisteredIdentifier"/>
<rdfs:label>object identifier 2.16.840.1.113883.6.163</rdfs:label>
<skos:definition>object identifier for the Medical Dictionary for Regulatory Activities</skos:definition>
<cmns-av:adaptedFrom>https://www.ich.org/page/meddra</cmns-av:adaptedFrom>
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2 changes: 2 additions & 0 deletions ISO/MetadataISO.rdf
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Expand Up @@ -36,6 +36,7 @@
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11615-MedicinalProducts/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11616-PharmaceuticalProducts/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO21090-HarmonizedDatatypes/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/MedicalDictionaryForRegulatoryActivities/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/CommonTerminologyCriteriaForAdverseEvents/"/>
<owl:imports rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/NorthAmericanRegistrationAuthorities/"/>
Expand Down Expand Up @@ -65,6 +66,7 @@
<dct:hasPart rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11615-MedicinalProducts/"/>
<dct:hasPart rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO11616-PharmaceuticalProducts/"/>
<dct:hasPart rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO21090-HarmonizedDatatypes/"/>
<dct:hasPart rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/ISO5218-RepresentationOfHumanSexes/"/>
<dct:hasPart rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/MedicalDictionaryForRegulatoryActivities/"/>
<dct:hasPart rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/CommonTerminologyCriteriaForAdverseEvents/"/>
<dct:hasPart rdf:resource="https://spec.pistoiaalliance.org/idmp/ontology/ISO/NorthAmericanJurisdiction/NorthAmericanRegistrationAuthorities/"/>
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