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As of release R20130628, YALMIP supports ECOS as a solver - simply use the command
sdpsettings('solver', 'ecos');
to select ECOS as the solver for your problem.
% Solve 1000 SOCPs x = sdpvar(3,1); Ufo = [norm(x) <= 2, norm(x+1) <= 2]; plot(Ufo, x, 'y', 1000, sdpsettings('solver', 'ecos'));