master -> main

facilebio · May 5, 2021 · 0062770 · 0062770
1 parent 7cbba71
commit 0062770
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Showing 5 changed files with 9 additions and 11 deletions.
diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
@@ -37,7 +37,7 @@ jobs:
         uses: actions/checkout@v2
 
       - name: Setup R
-        uses: r-lib/actions/setup-r@2fac31217e602dd30286b4c984a0ccf1afb18cbd
+        uses: r-lib/actions/setup-r@v1
         with:
           install-r: false
 

diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
@@ -1,6 +1,6 @@
 on:
   push:
-    branches: master
+    branches: main
     paths:
       - 'vignettes/**'
       - 'man/**'
@@ -28,10 +28,9 @@ jobs:
         uses: actions/checkout@v2
 
       - name: Setup R
-        uses: r-lib/actions/setup-r@2fac31217e602dd30286b4c984a0ccf1afb18cbd
-        # uses: r-lib/actions/setup-r@master
-        # with:
-        #   install-r: false
+        uses: r-lib/actions/setup-r@v1
+        with:
+          install-r: false
 
       # pandoc is already installed in the docker container
       # - uses: r-lib/actions/setup-pandoc@master

diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
@@ -20,10 +20,9 @@ jobs:
         uses: actions/checkout@v2
 
       - name: Setup R
-        uses: r-lib/actions/setup-r@2fac31217e602dd30286b4c984a0ccf1afb18cbd
-        # uses: r-lib/actions/setup-r@master
-        # with:
-        #   install-r: false
+        uses: r-lib/actions/setup-r@v1
+        with:
+          install-r: false
 
       - name: Test coverage
         run: covr::codecov(quiet = FALSE)

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -53,6 +53,7 @@ Suggests:
     org.Mm.eg.db,
     patchwork,
     RColorBrewer,
+    rmarkdown,
     RnaSeqGeneEdgeRQL,
     SummarizedExperiment,
     sva,

diff --git a/R/fdge-compare.R b/R/fdge-compare.R
@@ -383,7 +383,6 @@ viz.FacileTtestComparisonAnalysisResult <- function(
 
   gg.facets <- gg.base +
     ggplot2::facet_wrap(~ interaction_group, nrow = facets_nrow) +
-    ggplot2::ylab(NULL) +
     ggplot2::labs(title = NULL, subtitle = NULL)
 
   if (with_cor) {