Adding samtools to bwa Docker contaiiner

getwilds · Feb 9, 2024 · 2c279ca · 2c279ca
1 parent 1bd11ba
commit 2c279ca
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/Dockerfile_bwa b/Dockerfile_bwa
@@ -12,3 +12,9 @@ WORKDIR /bwa-0.7.17
 RUN make CC='gcc -fcommon'
 WORKDIR /
 RUN rm -rf bwa-0.7.17 bwa-0.7.17.tar.bz2
+RUN wget https://github.com/samtools/samtools/releases/download/1.11/samtools-1.11.tar.bz2
+RUN tar -jxf samtools-1.11.tar.bz2
+WORKDIR /samtools-1.11
+RUN ./configure && make && make install
+WORKDIR /
+RUN rm -rf samtools-1.11 samtools-1.11.tar.bz2