Merge pull request #41 from getwilds/cellranger-dh

Updating versions and link in CellRanger image and uploading to DockerHub

cellranger/Dockerfile_6.0.2

@@ -14,15 +14,15 @@ LABEL org.opencontainers.image.licenses=MIT
 
 # Installing prerequisites
 RUN apt-get update \
-  && apt-get install -y --no-install-recommends build-essential=12.10ubuntu1 wget=1.21.4-1ubuntu1 \
-  zlib1g-dev=1:1.3.dfsg-3ubuntu1 autoconf=2.71-3 automake=1:1.16.5-1.3ubuntu1 \
-  libncurses-dev=6.4+20240113-1ubuntu1 libbz2-dev=1.0.8-5ubuntu1 liblzma-dev=5.4.5-0.3 \
-  libssl-dev=3.0.10-1ubuntu4 libcurl4-gnutls-dev=8.5.0-2ubuntu2 \
+  && apt-get install -y --no-install-recommends build-essential=12.10ubuntu1 wget=1.21.4-1ubuntu4 \
+  zlib1g-dev=1:1.3.dfsg-3.1ubuntu2 autoconf=2.71-3 automake=1:1.16.5-1.3ubuntu1 \
+  libncurses-dev=6.4+20240113-1ubuntu2 libbz2-dev=1.0.8-5.1 liblzma-dev=5.6.1+really5.4.5-1 \
+  libssl-dev=3.0.13-0ubuntu3.1 libcurl4-gnutls-dev=8.5.0-2ubuntu10.1 \
   && rm -rf /var/lib/apt/lists/*
 
 # Pulling and extracting Cell Ranger source code
 RUN wget -q --no-check-certificate -O cellranger-6.0.2.tar.gz \
-  "https://cf.10xgenomics.com/releases/cell-exp/cellranger-6.0.2.tar.gz?Expires=1712197233&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Sxa8s8vTFJqJ0rsWV7GlM7tzeN3za6JjXwF6FDhyZjhL5im-rj9fkxE~3r2TeUMcJm5ZnsyVI~5HelwT49fMrPA3FSZhVj1XRZ-gKAQwEq4vgn4~89cR1pod-xpHFDqUxAgEQDNb~JO835U6Y7Y~HCzJoxQZek2vqVToq-gLpO8~Ec6ktZn2IHqxA1~PE6Jkdjk9X6J1xZsXvZb1wnMu3bVCIS-3e-ifS8fxt4P~ciTwCs7TvKRDQykxCgCbbeFYw31aguJnCFL2GKBzt0SVyl6jU4ds8B067Pg2pO6yCz7bwRT6cByTyjzKvwloU4Fi4mDoEnk2ekGfIMjM4NkUsA__" && tar -zxvf cellranger-6.0.2.tar.gz
+  "https://cf.10xgenomics.com/releases/cell-exp/cellranger-6.0.2.tar.gz?Expires=1718037805&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kkUm5ag6YEEohqvg6KHzR4RN4wWL3haRIVoPYmF0ZGG32mSScnfvwog-W2UH7i5gRW1joN8ZtYBTDvkNcY--8ULKaGE0CM6uMrF5bURZiqUVRFXEjf2e7OwFwR6RqXchC5GzNCrK4wPnVwoe9m2Qavem5twz2-U7jf8INPZp0OcgwAgwrzsEdkcdhbxkGaRCRoB629cCVmfJnbOaznErUbHzNk4gp2P2pbWlIPDgnrOQDg2jzC7FJPn9tTOH3QuIVYvBeBF~Vj2xCeWFYX1ajmvC~tLywAecUQ6wT0MpNyNVvkygynSJnXENby8DGZXfLLP0JclcoQqe8oKG1VmJhA__" && tar -zxvf cellranger-6.0.2.tar.gz
 # Note: Because the key for this link expires, these containers are 
 # excluded from the automated build-and-push GitHub Action. 
 # To make changes, provide an updated link and reupload manually.

cellranger/Dockerfile_latest

@@ -14,15 +14,15 @@ LABEL org.opencontainers.image.licenses=MIT
 
 # Installing prerequisites
 RUN apt-get update \
-  && apt-get install -y --no-install-recommends build-essential=12.10ubuntu1 wget=1.21.4-1ubuntu1 \
-  zlib1g-dev=1:1.3.dfsg-3ubuntu1 autoconf=2.71-3 automake=1:1.16.5-1.3ubuntu1 \
-  libncurses-dev=6.4+20240113-1ubuntu1 libbz2-dev=1.0.8-5ubuntu1 liblzma-dev=5.4.5-0.3 \
-  libssl-dev=3.0.10-1ubuntu4 libcurl4-gnutls-dev=8.5.0-2ubuntu2 \
+  && apt-get install -y --no-install-recommends build-essential=12.10ubuntu1 wget=1.21.4-1ubuntu4 \
+  zlib1g-dev=1:1.3.dfsg-3.1ubuntu2 autoconf=2.71-3 automake=1:1.16.5-1.3ubuntu1 \
+  libncurses-dev=6.4+20240113-1ubuntu2 libbz2-dev=1.0.8-5.1 liblzma-dev=5.6.1+really5.4.5-1 \
+  libssl-dev=3.0.13-0ubuntu3.1 libcurl4-gnutls-dev=8.5.0-2ubuntu10.1 \
   && rm -rf /var/lib/apt/lists/*
 
 # Pulling and extracting Cell Ranger source code
 RUN wget -q --no-check-certificate -O cellranger-6.0.2.tar.gz \
-  "https://cf.10xgenomics.com/releases/cell-exp/cellranger-6.0.2.tar.gz?Expires=1712197233&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Sxa8s8vTFJqJ0rsWV7GlM7tzeN3za6JjXwF6FDhyZjhL5im-rj9fkxE~3r2TeUMcJm5ZnsyVI~5HelwT49fMrPA3FSZhVj1XRZ-gKAQwEq4vgn4~89cR1pod-xpHFDqUxAgEQDNb~JO835U6Y7Y~HCzJoxQZek2vqVToq-gLpO8~Ec6ktZn2IHqxA1~PE6Jkdjk9X6J1xZsXvZb1wnMu3bVCIS-3e-ifS8fxt4P~ciTwCs7TvKRDQykxCgCbbeFYw31aguJnCFL2GKBzt0SVyl6jU4ds8B067Pg2pO6yCz7bwRT6cByTyjzKvwloU4Fi4mDoEnk2ekGfIMjM4NkUsA__" && tar -zxvf cellranger-6.0.2.tar.gz
+  "https://cf.10xgenomics.com/releases/cell-exp/cellranger-6.0.2.tar.gz?Expires=1718037805&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kkUm5ag6YEEohqvg6KHzR4RN4wWL3haRIVoPYmF0ZGG32mSScnfvwog-W2UH7i5gRW1joN8ZtYBTDvkNcY--8ULKaGE0CM6uMrF5bURZiqUVRFXEjf2e7OwFwR6RqXchC5GzNCrK4wPnVwoe9m2Qavem5twz2-U7jf8INPZp0OcgwAgwrzsEdkcdhbxkGaRCRoB629cCVmfJnbOaznErUbHzNk4gp2P2pbWlIPDgnrOQDg2jzC7FJPn9tTOH3QuIVYvBeBF~Vj2xCeWFYX1ajmvC~tLywAecUQ6wT0MpNyNVvkygynSJnXENby8DGZXfLLP0JclcoQqe8oKG1VmJhA__" && tar -zxvf cellranger-6.0.2.tar.gz
 # Note: Because the key for this link expires, these containers are 
 # excluded from the automated build-and-push GitHub Action. 
 # To make changes, provide an updated link and reupload manually.