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Flekschas/snippet aggregation#72

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flekschas wants to merge 67 commits intomasterhiglass/higlass-server:masterfrom flekschas/snippet-aggregationhiglass/higlass-server:flekschas/snippet-aggregationCopy head branch name to clipboard

+1,667-319

Commits

Commits on Jan 10, 2018

• PEP8tify

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  44a8bd8

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• PEP8tify

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  fd36f44

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• PEP8tify. Fixed issue get_cached_datapath(), os was undefined.

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  60a12ed

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• PEP8tify

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  841be6b

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• Add method to generate tiles from imtiles tile sets

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  41d8e78

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Commits on Jan 11, 2018

• Integrate tileset info for imtiles

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• Enable returning raw data (currently only for image tiles)

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• Update

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• Query with ints

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Commits on Jan 12, 2018

• Increase compatibility with clodius db setup

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• Add support for 2dannodb (2d annotations for gigapixel images)

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• Support 2dannodb

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  95c2ce3

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Commits on Jan 23, 2018

• Extend fragments API for image snippets

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Commits on Jan 24, 2018

• Fix image fragments endpoint

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  a20edf8

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• Fix tile stitching for snippets

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• Flexibilify: return a data type for each fragment

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Commits on Jan 30, 2018

• Make width and height optional (robustification)

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  00ecadd

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• Add support for geoJson db tile sets

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  b660add

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• Fix 2 typos (greater smaller for lat is flipped and +1 issue in getting tile ids)

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  0746aeb

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• Adjust to min max lng and lat values (lat goes from max to min!)

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  9e3aaa0

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• Clarify method names

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  24b29fa

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• Fix geo querying

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  eb2c32f

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Commits on Jan 31, 2018

• Concretefy exception

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  303ee91

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• Add constant tileset (for OpenStreetMaps)

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  80c2922

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• Add support for getting osm image tile snippets

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  1e4cc3b

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• Add support for padding for osm images

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  377f3f3

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• Update

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  2007116

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Commits on Feb 1, 2018

• Fix regression

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  fc33ec8

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Commits on Feb 15, 2018

• Add snippet aggregation

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  7f890a1

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Commits on Feb 16, 2018

• Add option for returning 1D previews (i.e., aggregates along the Y axis)

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  bc8ea2f

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Commits on Feb 18, 2018

• Enable aggregation of images (from imtiles or osm). Fix a bug when pulling osm aggregates

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  527f11c

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• Add utility function for getting params by a definition file and return the definition file on GET as help

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  15639a2

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• PEP8

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  5564574

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• Add doc strings. Add image encoding

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  4689048

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• Implement representative fragments

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• Add CacheControl for request caching

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  1c98685

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• Sort representative frags by size if less than 5

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  058a4fc

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• Implement max previews

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  2adf994

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• Make preview height and spacing customizable

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  b6c70c0

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• Fix regression

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  8580d6e

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Commits on Feb 19, 2018

• Export separate previews for easier interaction

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• Add scikit-learn

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  5a14d9e

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Commits on Feb 20, 2018

• Fix retuning sorted "representatives"

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Commits on Mar 4, 2018

• Add support for 2d previews for pile leafing

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  dbd58d2

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• Fix bug when var is unset

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  8fa462f

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• Allow setting redis locally

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  3bf6ded

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• Use all params for unique id

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Commits on Mar 12, 2018

• To be serializable by Django migrations

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• Massive optimizations

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Commits on Mar 13, 2018

• Make sure there are no two duplicated representatives

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• Return the indices of the representatives

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Commits on Mar 14, 2018

• Add support for predefined rep selection. Truly choose largest ROI first

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  08563a3

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• Take abs to avoid bugs in LngLat coords

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  fe8bb46

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Commits on Mar 22, 2018

• Fix 1D previews

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• Remove log

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Commits on Mar 23, 2018

• Avoid out of bounds retrieval

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  674004b

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Commits on May 8, 2018

• Fix a CSV bug and update OSM image tilesetinfo

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  5d7d662

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• Merge branch 'master' into flekschas/snippet-aggregation

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  c28b2e7

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• Fixed test

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  8610e5f

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Commits on May 9, 2018

• Fix regression

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  3aa7d7c

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Commits on May 17, 2018

• Switch to versioned cooler

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  0fff6f8

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• Provide fixed version for determinism

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  188fb2f

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• Add backwards compatibility

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  3432a55

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Commits on Jun 4, 2018

• Remove print statements

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  22bed9e

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• Add functionality to download multiple images as a zip

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  78f4c4c

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Commits on Jun 5, 2018

• Merge branch 'master' into flekschas/snippet-aggregation

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Commits on Jun 6, 2018

• Cap ignored diagonal instead of setting it to zero

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