Update cran-comments

hughjonesd · Nov 11, 2024 · 800e219 · 800e219
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diff --git a/cran-comments.md b/cran-comments.md
@@ -1,12 +1,12 @@
 
-New data for R 4.4.1. 
+New data for R 4.4.2.
 
 
 ## Test environments
 
-* OS X (local), R 4.4.0
+* OS X (local), R 4.4.1
 * windows (on win-builder), R-devel and R-release
-* mac-builder gave a Bad Gateway error
+* mac-builder 
 
 ## R CMD check results
 

diff --git a/revdep/README.md b/revdep/README.md
@@ -1,24 +1,30 @@
 # Platform
 
-|field    |value                                    |
-|:--------|:----------------------------------------|
-|version  |R version 4.4.0 (2024-04-24)             |
-|os       |macOS Sonoma 14.5                        |
-|system   |aarch64, darwin20                        |
-|ui       |RStudio                                  |
-|language |(EN)                                     |
-|collate  |en_US.UTF-8                              |
-|ctype    |en_US.UTF-8                              |
-|tz       |Europe/London                            |
-|date     |2024-06-24                               |
-|rstudio  |2024.04.2+764 Chocolate Cosmos (desktop) |
-|pandoc   |3.1.10 @ /usr/local/bin/pandoc           |
+|field    |value                                                                                            |
+|:--------|:------------------------------------------------------------------------------------------------|
+|version  |R version 4.4.1 (2024-06-14)                                                                     |
+|os       |macOS 15.1                                                                                       |
+|system   |aarch64, darwin20                                                                                |
+|ui       |RStudio                                                                                          |
+|language |(EN)                                                                                             |
+|collate  |en_US.UTF-8                                                                                      |
+|ctype    |en_US.UTF-8                                                                                      |
+|tz       |Europe/London                                                                                    |
+|date     |2024-11-11                                                                                       |
+|rstudio  |2024.09.0+375 Cranberry Hibiscus (desktop)                                                       |
+|pandoc   |3.2 @ /Applications/RStudio.app/Contents/Resources/app/quarto/bin/tools/aarch64/ (via rmarkdown) |
 
 # Dependencies
 
 |package   |old     |new     |Δ  |
 |:---------|:-------|:-------|:--|
-|rcheology |4.4.0.0 |4.4.1.0 |*  |
+|rcheology |4.4.1.0 |4.4.2.0 |*  |
 
 # Revdeps
 
+## Failed to check (1)
+
+|package |version |error |warning |note |
+|:-------|:-------|:-----|:-------|:----|
+|hutils  |?       |      |        |     |
+
diff --git a/revdep/cran.md b/revdep/cran.md
@@ -1,6 +1,6 @@
 ## revdepcheck results
 
-We checked 1 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+We checked 1 reverse dependencies (0 from CRAN + 1 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.
 
  * We saw 0 new problems
  * We failed to check 0 packages

diff --git a/revdep/failures.md b/revdep/failures.md
@@ -1 +1,73 @@
-*Wow, no problems at all. :)*
+# hutils
+
+<details>
+
+* Version: 
+* GitHub: https://github.com/hughjonesd/rcheology
+* Source code: NA
+* Number of recursive dependencies: 0
+
+</details>
+
+## Error before installation
+
+### Devel
+
+```
+
+
+
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+...
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+
+
+```
+### CRAN
+
+```
+
+
+
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+...
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+Warning: unable to access index for repository https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4:
+  cannot open URL 'https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4/PACKAGES'
+
+
+```