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final changes
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@leacotan
leacotan committed Oct 16, 2018
1 parent d666a68 commit 022b797
Showing 1 changed file with 13 additions and 114 deletions.
127 changes: 13 additions & 114 deletions GUI.py
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Original file line number Diff line number Diff line change
Expand Up @@ -17,103 +17,14 @@
protein_fasta_filename = ""
fasta_file_name = ""
codon_usage_tables_filnames_list = []

def run_Taico():
"""
runs the TaiCo optimization program
:return:
"""
from TaiCO_windows import TaiCO
TaiCO.run_taico()
return
MOOLTI_2018 = "MOOLTi 2018"

def open_hebrew_u_website():
"""
prints the official iGEM website for Hebrew U
:return:
"""
webbrowser.open("http://2018.igem.org/Team:HebrewU")
def open_DTU_website():
"""
prints the official iGEM website for DTU
:return:
"""
webbrowser.open("http://2016.igem.org/Team:DTU-Denmark")

def create_main_window():
"""
creates and runs the main loop for the tool selection screen.
:return:
"""
#create window
root = Tk()
root.configure(background='grey')
root.geometry("700x422")
root.resizable(width=False, height=False)
root.title("MulTaiCO 2018 HebrewU (and DTU)")

#status bar
status = Label(root,text="For help, please contact : HujiGEM@gmail.com",bd=2,relief=SUNKEN,anchor=W)
status.pack(side=BOTTOM,fill=X)

#rectangles wiht colours
canvas = Canvas(root, width = 700, height = 422)
canvas.pack()
myrectangle1 = canvas.create_rectangle(0, 0, 700, 65, fill='black')
canvas.itemconfig(myrectangle1, fill='#464444')

#gui name
gui_Mul = Label(root, text="Mul",font=("Calibri", 23),bg="#464444",fg="green")
gui_T = Label(root, text="T",font=("Calibri", 23, "bold"),bg="#464444",fg="white")
gui_aiCO = Label(root, text="aiCO",font=("Calibri", 23),bg="#464444",fg="red")
gui_Optimizeby = Label(root, text="Optimize by:",font=("Calibri", 15),fg="black")

#Radio Buttons
var = IntVar()
var.set(1)

Radio1 = Radiobutton(root, text="MulT (Multiple organism optimization by tRNA freq)",font=("Calibri", 15), variable=var,value=1, fg="#464444")
Radio2 = Radiobutton(root, text="TaiCO (Single optimization by tAI)",font=("Calibri", 15), variable=var, value=2, fg="#464444" )


def run_option():
"""
the function choosing which program to activate
:return:
"""
root.destroy()
if var.get() == 1:
create_Hebrew_U_window()
elif var.get() == 2:
run_Taico()


#next button
Screen1_next = tk.Button(root,text="Next",font=("Calibri", 15) , command = run_option )

#DTU logo
photo_DTU = PhotoImage(file="CodonOptimization/DTU.gif")
Buttonimage=Button(root, image=photo_DTU,bg="white",relief=RAISED,command = open_DTU_website)
Buttonimage.place(x=620,y=350)


#HebrewU logo
photo_HebrewU = PhotoImage(file="CodonOptimization/HebrewU.gif")
Buttonimage=Button(root, image=photo_HebrewU,bg="white",relief=RAISED, command = open_hebrew_u_website)
Buttonimage.place(x=0,y=370)

gui_description = Label(root, text="Multi-functional optimization tool",font=("Calibri", 12),bg="#464444",fg="white")
#placing
gui_description.place(x=238,y=40)
gui_Mul.place(x=283,y=4)
gui_T.place(x=335,y=4)
gui_aiCO.place(x=351,y=4)
gui_Optimizeby.place(x=100,y=100)
Radio1.place(x=150, y=150)
Radio2.place(x=150, y=200)
Screen1_next.place(x=500, y=275)
root.mainloop()


#-------------------------------HebrewU 1 window------------------------------------------
def create_Hebrew_U_window():
Expand All @@ -125,7 +36,7 @@ def create_Hebrew_U_window():
root2.configure(background='#00B2B2')
root2.geometry("700x422")
root2.resizable(width=False, height=False)
root2.title("MulTaiCO 2018 HebrewU (and DTU)")
root2.title("MOOLTi 2018 HebrewU ")


#rectangles wiht colours
Expand All @@ -135,21 +46,13 @@ def create_Hebrew_U_window():
canvas.itemconfig(myrectangle1, fill='#00B2B2')

#gui name
gui_MulT = Label(root2, text="MulT",font=("Calibri", 23),bg="#00B2B2",fg="white")
gui_descriptio_MulT = Label(root2, text="Multiple organism optimization by tRNA freq",font=("Calibri", 12),bg="#00B2B2",fg="white")
gui_MulT = Label(root2, text="MOOLTi",font=("Calibri", 23),bg="#00B2B2",fg="white")
gui_descriptio_MulT = Label(root2, text=" Multiple Organism Optimization Lab Tool for iGEM ",font=("Calibri", 12),bg="#00B2B2",fg="white")
#create labels
fasta_label = Label(root2, text="Upload protein fasta file :", bg="#F0F0F0",font=("calibri",11))
restriction_label = Label(root2, text="Upload restriction sites file (optional) :", bg="#F0F0F0",font=("calibri",11))
destination_label = Label(root2, text="Enter destination file:", bg="#F0F0F0",font=("calibri",11))

def get_back_to_main1():
"""
destroys the current screen and returns to previous screen.
:return:
"""
root2.destroy()
create_main_window()

def second_menu():
"""
validates input, continues to second menu
Expand All @@ -164,25 +67,23 @@ def second_menu():
protein_fasta_filename = fasta_entry.get()
ouput_file_location = output_entry.get()
if protein_fasta_filename == "" or protein_fasta_filename.split(".")[-1]!= "fasta":
messagebox.showinfo('MulT 2018',
messagebox.showinfo('MOOLTi 2018',
'Please select a FASTA file')
return

if not os.path.exists(protein_fasta_filename) :
messagebox.showinfo('MulT 2018',
messagebox.showinfo(MOOLTI_2018,
'Invalid or unexisting FASTA file, please select another')
return
if not os.path.exists(protein_fasta_filename) and protein_fasta_filename != "" :
messagebox.showinfo('MulT 2018',"Non- existing restriction file. ")
messagebox.showinfo(MOOLTI_2018,"Non- existing restriction file. ")
return
root2.destroy()
create_second_hebrew_U_window()


#next button
Screen1_next2 = tk.Button(root2,text="Next",font=("Calibri", 15 ), command =second_menu )
#back_button
screen1_back = tk.Button(root2,text="Back",font=("Calibri", 15) , command = get_back_to_main1 )
#creates entrys
output_entry = Entry(root2)
fasta_entry = Entry(root2)
Expand Down Expand Up @@ -249,7 +150,6 @@ def output_file():
output_search_button.place(x=380, y=223)
search_restriction_button.place(x = 380, y = 280)
Screen1_next2.place(x=600,y=325)
screen1_back.place(x = 100, y = 325)

#place entrys
fasta_entry.place(x = 480, y = 167)
Expand Down Expand Up @@ -279,7 +179,7 @@ def create_second_hebrew_U_window():
root3.configure(background='#00B2B2')
root3.geometry("700x422")
root3.resizable(width=False, height=False)
root3.title("MulTaiCO 2018 HebrewU (and DTU)")
root3.title("MOOLTi 2018 HebrewU")

global codon_usage_tables_filnames_list
def get_back_to_second_window():
Expand All @@ -298,8 +198,8 @@ def get_back_to_second_window():
canvas.itemconfig(myrectangle1, fill='#00B2B2')

#gui name
gui_MulT4 = Label(root3, text="MulT", font=("Calibri", 23), bg="#00B2B2", fg="white")
gui_descriptio_MulT4 = Label(root3, text="Multiple organism optimization by tRNA freq",font=("Calibri", 12),bg="#00B2B2",fg="white")
gui_MulT4 = Label(root3, text="MOOLTi", font=("Calibri", 23), bg="#00B2B2", fg="white")
gui_descriptio_MulT4 = Label(root3, text=" Multiple Organism Optimization Lab Tool for iGEM", font=("Calibri", 12),bg="#00B2B2",fg="white")

# select file with sequences
def input_file(v):
Expand Down Expand Up @@ -422,10 +322,9 @@ def handle_click():

Message = run_optimization()

messagebox.showinfo('MulT 2018', Message)
messagebox.showinfo(MOOLTI_2018, Message)
root3.destroy()
create_main_window()

create_Hebrew_U_window()

Screen3_Optimize = Button(root3, text="Optimize", font=("Calibri", 15), command=handle_click)
Screen3_Optimize.place(x=500, y=350)
Expand All @@ -438,4 +337,4 @@ def handle_click():

if __name__ == '__main__':

create_main_window()
create_Hebrew_U_window()

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