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tweaking new BiocCheck action
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jr-leary7 committed Nov 20, 2023
1 parent 6753f2c commit be1a31f
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions .github/workflows/bioc-check-new.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -27,9 +27,9 @@ jobs:
- name: Run BiocCheck
run: |
bc_res <- BiocCheck::BiocCheck()
print(paste0("Errors": length(bc_res$error), "\n"))
print(paste0("Warnings": length(bc_res$warning), "\n"))
print(paste0("Notes": length(bc_res$note), "\n"))
print(paste0("Errors: ", length(bc_res$error), "\n"))
print(paste0("Warnings: ", length(bc_res$warning), "\n"))
print(paste0("Notes: ", length(bc_res$note), "\n"))
n_errors <- length(bc_res$error)
Sys.setenv("BC_ERRORS" = n_errors)
shell: Rscript {0}
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