Prepare release (#17)

.github/workflows/cldf-validation.yml

@@ -12,7 +12,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.11]
+        python-version: [3.12]
 
     steps:
     - uses: actions/checkout@v2

.zenodo.json

@@ -18,6 +18,10 @@
             "name": "Johann-Mattis List",
             "type": "Editor"
         },
+        {
+            "name": "Christoph Rzymski",
+            "type": "Editor"
+        },
         {
             "name": "Tiago Tresoldi",
             "type": "Other"

CONTRIBUTORS.md

@@ -2,7 +2,8 @@
 
 Name | GitHub user | Description | Role
 --- | --- | --- | ---
-Johann-Mattis List | @lingulist | orthography profile | Editor 
+Johann-Mattis List | @lingulist | orthography profile | Editor
+Christoph Rzymski  | @chrzyki   | patron | Editor
 Tiago Tresoldi | @tresoldi | code | Other
 Derek Nurse | | original data collection | Author
 Gerard Philippson | | original data collection | Author

README.md

@@ -29,8 +29,8 @@ Conceptlists in Concepticon:
 ![BIPA: 100%](https://img.shields.io/badge/BIPA-100%25-brightgreen.svg "BIPA: 100%")
 ![CLTS SoundClass: 100%](https://img.shields.io/badge/CLTS%20SoundClass-100%25-brightgreen.svg "CLTS SoundClass: 100%")
 
-- **Varieties:** 127
-- **Concepts:** 1,052
+- **Varieties:** 127 (linked to 107 different Glottocodes)
+- **Concepts:** 1,052 (linked to 650 different Concepticon concept sets)
 - **Lexemes:** 115,642
 - **Sources:** 4
 - **Synonymy:** 1.01
@@ -43,7 +43,8 @@ Conceptlists in Concepticon:
 
 Name | GitHub user | Description | Role
 --- | --- | --- | ---
-Johann-Mattis List | @lingulist | orthography profile | Editor 
+Johann-Mattis List | @lingulist | orthography profile | Editor
+Christoph Rzymski  | @chrzyki   | patron | Editor
 Tiago Tresoldi | @tresoldi | code | Other
 Derek Nurse | | original data collection | Author
 Gerard Philippson | | original data collection | Author

cldf/README.md

@@ -14,8 +14,8 @@ property | value
 [dc:identifier](http://purl.org/dc/terms/identifier) | http://www.cbold.ish-lyon.cnrs.fr/Docs/TLSinfo.html
 [dc:license](http://purl.org/dc/terms/license) | https://creativecommons.org/licenses/by/4.0/
 [dcat:accessURL](http://www.w3.org/ns/dcat#accessURL) | https://github.com/lexibank/tls
-[prov:wasDerivedFrom](http://www.w3.org/ns/prov#wasDerivedFrom) | <ol><li><a href="https://github.com/lexibank/tls/tree/v4.1.1">lexibank/tls v4.1.1</a></li><li><a href="https://github.com/glottolog/glottolog/tree/v4.8">Glottolog v4.8</a></li><li><a href="https://github.com/concepticon/concepticon-data/tree/v3.1.0">Concepticon v3.1.0</a></li><li><a href="https://github.com/cldf-clts/clts/tree/v2.2.0">CLTS v2.2.0</a></li></ol>
-[prov:wasGeneratedBy](http://www.w3.org/ns/prov#wasGeneratedBy) | <ol><li><strong>lingpy-rcParams</strong>: <a href="./lingpy-rcParams.json">lingpy-rcParams.json</a></li><li><strong>python</strong>: 3.10.12</li><li><strong>python-packages</strong>: <a href="./requirements.txt">requirements.txt</a></li></ol>
+[prov:wasDerivedFrom](http://www.w3.org/ns/prov#wasDerivedFrom) | <ol><li><a href="https://github.com/lexibank/tls/tree/v4.1.1">lexibank/tls v4.1.1</a></li><li><a href="https://github.com/glottolog/glottolog/tree/v5.0">Glottolog v5.0</a></li><li><a href="https://github.com/concepticon/concepticon-data/tree/v3.2.0">Concepticon v3.2.0</a></li><li><a href="https://github.com/cldf-clts/clts/tree/v2.3.0">CLTS v2.3.0</a></li></ol>
+[prov:wasGeneratedBy](http://www.w3.org/ns/prov#wasGeneratedBy) | <ol><li><strong>lingpy-rcParams</strong>: <a href="./lingpy-rcParams.json">lingpy-rcParams.json</a></li><li><strong>python</strong>: 3.12.4</li><li><strong>python-packages</strong>: <a href="./requirements.txt">requirements.txt</a></li></ol>
 [rdf:ID](http://www.w3.org/1999/02/22-rdf-syntax-ns#ID) | tls
 [rdf:type](http://www.w3.org/1999/02/22-rdf-syntax-ns#type) | http://www.w3.org/ns/dcat#Distribution
 

cldf/cldf-metadata.json

@@ -23,19 +23,19 @@
         {
             "rdf:about": "https://github.com/glottolog/glottolog",
             "rdf:type": "prov:Entity",
-            "dc:created": "v4.8",
+            "dc:created": "v5.0",
             "dc:title": "Glottolog"
         },
         {
             "rdf:about": "https://github.com/concepticon/concepticon-data",
             "rdf:type": "prov:Entity",
-            "dc:created": "v3.1.0",
+            "dc:created": "v3.2.0",
             "dc:title": "Concepticon"
         },
         {
             "rdf:about": "https://github.com/cldf-clts/clts",
             "rdf:type": "prov:Entity",
-            "dc:created": "v2.2.0",
+            "dc:created": "v2.3.0",
             "dc:title": "CLTS"
         }
     ],
@@ -46,7 +46,7 @@
         },
         {
             "dc:title": "python",
-            "dc:description": "3.10.12"
+            "dc:description": "3.12.4"
         },
         {
             "dc:title": "python-packages",

cldf/lingpy-rcParams.json

@@ -64,7 +64,7 @@
         10,
         10
     ],
-    "filename": "lingpy-2023-12-21",
+    "filename": "lingpy-2024-08-01",
     "gap_symbol": "-",
     "gap_weight": 0.5,
     "gop": -2,
@@ -123,7 +123,7 @@
     "scorer": {},
     "sonar": true,
     "stress": "\u02c8\u02cc'",
-    "timestamp": "2023-12-21 11:12",
+    "timestamp": "2024-08-01 11:06",
     "tones": "\u00b9\u00b2\u00b3\u2074\u2075\u2076\u2077\u2078\u2079\u2070\u2081\u2082\u2083\u2084\u2085\u2086\u2087\u2088\u2089\u20800123456789\u02e5\u02e6\u02e7\u02e8\u02e9\u02ea\u02eb-\ua708-\ua709-\ua70a-\ua70b-\ua70c-\ua70d-\ua70e-\ua70f-\ua710-\ua711-\ua712-\ua713-\ua714-\ua715-\ua716-\ua717-\ua718-\ua719-\ua71a-\ua700-\ua701-\ua702-\ua703-\ua704-\ua705-\ua706-\ua707",
     "tree_calc": "neighbor",
     "unique_sequences": true,

cldf/parameters.csv

@@ -323,7 +323,7 @@ ID,Name,Concepticon_ID,Concepticon_Gloss,Swahili_Gloss,NUMBER
 316_garden,garden,586,GARDEN,bustani,316
 317_hippopotamus,hippopotamus,,,kiboko,317
 318_rhinoceros,rhinoceros,2591,RHINOCEROS,kifaru,318
-319_crossariver,cross (a river),1742,TRAVERSE,(ku)vuka,319
+319_crossariver,cross (a river),574,TRANSIT,(ku)vuka,319
 320_hunger,hunger,1864,HUNGER,njaa,320
 321_rubbishheap,rubbish heap,909,GARBAGE,jaa,321
 322_water,water,948,WATER,maji,322

cldf/requirements.txt

@@ -1,59 +1,56 @@
 appdirs==1.4.4
-attrs==23.1.0
-Babel==2.14.0
-bibtexparser==2.0.0b4
-bs4==0.0.1
-certifi==2023.11.17
+attrs==23.2.0
+Babel==2.15.0
+bibtexparser==2.0.0b7
+bs4==0.0.2
+certifi==2024.7.4
 cldfbench==1.14.0
 cldfcatalog==1.5.1
-cldfzenodo==2.1.0
-clldutils==3.22.1
+cldfzenodo==2.1.1
+clldutils==3.22.2
 colorama==0.4.6
-colorlog==6.8.0
-csvw==3.2.1
-exceptiongroup==1.2.0
+colorlog==6.8.2
+csvw==3.3.0
 gitdb==4.0.11
-greenlet==3.0.2
-idna==3.6
-idspy==0.3.0
+greenlet==3.0.3
+idna==3.7
 iniconfig==2.0.0
 isodate==0.6.1
-jsonschema==4.20.0
+jsonschema==4.23.0
 lingpy==2.6.13
-lxml==4.9.3
-Markdown==3.5.1
+lxml==5.2.2
+Markdown==3.6
 nameparser==1.1.3
-networkx==3.2.1
+networkx==3.3
 newick==1.9.0
-numpy==1.26.2
-openpyxl==3.1.2
-packaging==23.2
-pluggy==1.3.0
-purl==1.6
+numpy==2.0.1
+openpyxl==3.1.5
+packaging==24.1
+pluggy==1.5.0
 pybtex==0.24.0
-pycldf==1.36.0
-pyclts==3.1.1
-pyconcepticon==3.0.0
-pycountry==23.12.11
-pyglottolog==3.12.0
+pycldf==1.38.1
+pyclts==3.2.0
+pyconcepticon==3.1.0
+pycountry==24.6.1
+pyglottolog==3.13.0
 pylatexenc==2.10
-pylexibank==3.4.0
-pytest==7.4.3
-python-dateutil==2.8.2
+pylexibank==3.5.0
+pytest==8.3.2
+python-dateutil==2.9.0.post0
 rdflib==7.0.0
-referencing==0.32.0
-regex==2023.10.3
-requests==2.31.0
+referencing==0.35.1
+regex==2024.7.24
+requests==2.32.3
 rfc3986==1.5.0
 segments==2.2.1
 six==1.16.0
 smmap==5.0.1
 soupsieve==2.5
-SQLAlchemy==1.4.50
+SQLAlchemy==1.4.53
 tabulate==0.9.0
 termcolor==2.4.0
-tqdm==4.66.1
+tqdm==4.66.4
 uritemplate==4.1.1
-urllib3==2.1.0
+urllib3==2.2.2
 xlrd==2.0.1
 zenodoclient==0.5.1

lexibank_tls.py

@@ -18,14 +18,18 @@ class CustomConcept(pylexibank.Concept):
 class Dataset(pylexibank.Dataset):
     dir = Path(__file__).parent
     id = "tls"
+    writer_options = dict(keep_languages=False, keep_parameters=False)
+
     concept_class = CustomConcept
     form_spec = pylexibank.FormSpec(
         brackets={"(": ")", "[": "]"},
         separators=",;/",
         missing_data=("-", "?", "???", "+", "_", "--_", "!"),
         replacements=[
             ("(kU)d\x97s\x87 ? +", ""),
-            ("\x88", ""), ("\x87", ""), ("\x97", ""), 
+            ("\x88", ""),
+            ("\x87", ""),
+            ("\x97", ""),
             (" ", "_"),
             ("#__#_pencil_only_#", ""),
             ('"', ""),
@@ -45,9 +49,8 @@ class Dataset(pylexibank.Dataset):
             ("right_person", "-"),
             ("shitere_shi_shilenj..", "shitere"),
             ("#", ""),
-
-            ],
-        first_form_only=True
+        ],
+        first_form_only=True,
     )
 
     def cmd_makecldf(self, args):