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Initial commit for public release
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lukehollis committed Dec 4, 2024
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4 changes: 4 additions & 0 deletions .dockerignore
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.env
.env.local
node_modules
test-results
8 changes: 8 additions & 0 deletions .env.local.example
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# Caduceus
DEFAULT_MODEL=gpt-4o-mini
NEXT_PUBLIC_DEFAULT_SYSTEM_PROMPT=You are Caduceus, a healthcare chatBot, built on top of ChatGPT, a Large Language model trained by OpenAI. Doctors and clinicians use you to generate text for patients. They edit your responses. Follow the user's instructions carefully. Respond using markdown.
OPENAI_API_KEY=YOUR_KEY

# Google
GOOGLE_API_KEY=YOUR_API_KEY
GOOGLE_CSE_ID=YOUR_ENGINE_ID
3 changes: 3 additions & 0 deletions .eslintrc.json
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{
"extends": "next/core-web-vitals"
}
69 changes: 69 additions & 0 deletions .github/workflows/deploy-docker-image.yaml
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name: Docker

# This workflow uses actions that are not certified by GitHub.
# They are provided by a third-party and are governed by
# separate terms of service, privacy policy, and support
# documentation.

on:
push:
branches: ['main']

env:
# Use docker.io for Docker Hub if empty
REGISTRY: ghcr.io
# github.repository as <account>/<repo>
IMAGE_NAME: ${{ github.repository }}

jobs:
build:
runs-on: ubuntu-latest
permissions:
contents: read
packages: write
# This is used to complete the identity challenge
# with sigstore/fulcio when running outside of PRs.
id-token: write

steps:
- name: Checkout repository
uses: actions/checkout@v3

- name: Set up QEMU
uses: docker/setup-qemu-action@v2.1.0

# Workaround: https://github.com/docker/build-push-action/issues/461
- name: Setup Docker buildx
uses: docker/setup-buildx-action@79abd3f86f79a9d68a23c75a09a9a85889262adf

# Login against a Docker registry except on PR
# https://github.com/docker/login-action
- name: Log into registry ${{ env.REGISTRY }}
if: github.event_name != 'pull_request'
uses: docker/login-action@28218f9b04b4f3f62068d7b6ce6ca5b26e35336c
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

# Extract metadata (tags, labels) for Docker
# https://github.com/docker/metadata-action
- name: Extract Docker metadata
id: meta
uses: docker/metadata-action@98669ae865ea3cffbcbaa878cf57c20bbf1c6c38
with:
images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}

# Build and push Docker image with Buildx (don't push on PR)
# https://github.com/docker/build-push-action
- name: Build and push Docker image
id: build-and-push
uses: docker/build-push-action@ac9327eae2b366085ac7f6a2d02df8aa8ead720a
with:
context: .
platforms: "linux/amd64,linux/arm64"
push: ${{ github.event_name != 'pull_request' }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=gha
cache-to: type=gha,mode=max
24 changes: 24 additions & 0 deletions .github/workflows/run-test-suite.yml
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name: Run Unit Tests
on:
push:
branches:
- main
pull_request:
branches:
- main

jobs:
test:
runs-on: ubuntu-latest
container:
image: node:16

steps:
- name: Checkout code
uses: actions/checkout@v2

- name: Install dependencies
run: npm ci

- name: Run Vitest Suite
run: npm test
40 changes: 40 additions & 0 deletions .gitignore
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# See https://help.github.com/articles/ignoring-files/ for more about ignoring files.

# dependencies
/node_modules
/.pnp
.pnp.js

# testing
/coverage
/test-results

# next.js
/.next/
/out/
/dist

# production
/build

# misc
.DS_Store
*.pem

# debug
npm-debug.log*
yarn-debug.log*
yarn-error.log*
.pnpm-debug.log*

# local env files
.env*.local

# vercel
.vercel

# typescript
*.tsbuildinfo
next-env.d.ts
.idea
pnpm-lock.yaml
45 changes: 45 additions & 0 deletions CONTRIBUTING.md
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# Contributing Guidelines

**Welcome to Caduceus!**

We appreciate your interest in contributing to our project.

Before you get started, please read our guidelines for contributing.

## Types of Contributions

We welcome the following types of contributions:

- Bug fixes
- New features
- Documentation improvements
- Code optimizations
- Translations
- Tests

## Getting Started

To get started, fork the project on GitHub and clone it locally on your machine. Then, create a new branch to work on your changes.

```
git clone https://caduc.eus.git
cd chatbot-ui
git checkout -b my-branch-name
```

Before submitting your pull request, please make sure your changes pass our automated tests and adhere to our code style guidelines.

## Pull Request Process

1. Fork the project on GitHub.
2. Clone your forked repository locally on your machine.
3. Create a new branch from the main branch.
4. Make your changes on the new branch.
5. Ensure that your changes adhere to our code style guidelines and pass our automated tests.
6. Commit your changes and push them to your forked repository.
7. Submit a pull request to the main branch of the main repository.

## Contact

If you have any questions or need help getting started, feel free to reach out to me on [Twitter](https://twitter.com/mckaywrigley).
29 changes: 29 additions & 0 deletions Dockerfile
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# ---- Base Node ----
FROM node:19-alpine AS base
WORKDIR /app
COPY package*.json ./

# ---- Dependencies ----
FROM base AS dependencies
RUN npm ci

# ---- Build ----
FROM dependencies AS build
COPY . .
RUN npm run build

# ---- Production ----
FROM node:19-alpine AS production
WORKDIR /app
COPY --from=dependencies /app/node_modules ./node_modules
COPY --from=build /app/.next ./.next
COPY --from=build /app/public ./public
COPY --from=build /app/package*.json ./
COPY --from=build /app/next.config.js ./next.config.js
COPY --from=build /app/next-i18next.config.js ./next-i18next.config.js

# Expose the port the app will run on
EXPOSE 3000

# Start the application
CMD ["npm", "start"]
18 changes: 18 additions & 0 deletions Makefile
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include .env

.PHONY: all

build:
docker build -t chatbot-ui .

run:
export $(cat .env | xargs)
docker stop chatbot-ui || true && docker rm chatbot-ui || true
docker run --name chatbot-ui --rm -e OPENAI_API_KEY=${OPENAI_API_KEY} -p 3000:3000 chatbot-ui

logs:
docker logs -f chatbot-ui

push:
docker tag chatbot-ui:latest ${DOCKER_USER}/chatbot-ui:${DOCKER_TAG}
docker push ${DOCKER_USER}/chatbot-ui:${DOCKER_TAG}
104 changes: 104 additions & 0 deletions README.md
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# Caduceus, Open Healthcare AI Scribe


Caduceus can transcribe entire office visits in real-time using voice dictation, automatically converting spoken word into structured medical documentation.

See the current version [here](https://app.caduc.eus/).

The platform comes with pre-built templates for common healthcare workflows like progress notes, patient communications, and procedure pre-authorizations. You can see a live demo at app.caduc.eus to experience how it streamlines medical documentation.

Based on [Chatbot UI](https://github.com/mckaywrigley/chatbot-ui). This repo has many updates to the Next.js and React code, so you can similarly use it as a starting point for your own project.


## Updates

I continue work on this project in my spare time, especially while I'm in Egypt and Honduras where the physicians I work with mainly are using it. If you'd like to contribute or have feature requests, please reach out.



## Deploy

**Vercel**

Host your own live version of Caduceus with Vercel.

[![Deploy with Vercel](https://vercel.com/button)](https://vercel.com/new/clone?repository-url=https%3A%2F%2Fgithub.com%2Fmckaywrigley%2Fchatbot-ui)

**Docker**

Build locally:

```shell
docker build -t chatgpt-ui .
docker run -e OPENAI_API_KEY=xxxxxxxx -p 3000:3000 chatgpt-ui
```

Pull from ghcr:

```
docker run -e OPENAI_API_KEY=xxxxxxxx -p 3000:3000 ghcr.io/mckaywrigley/chatbot-ui:main
```

## Running Locally

**1. Clone Repo**

```bash
git clone https://caduc.eus.git
```

**2. Install Dependencies**

```bash
npm i
```

**3. Provide OpenAI API Key**

Create a .env.local file in the root of the repo with your OpenAI API Key:

```bash
OPENAI_API_KEY=YOUR_KEY
```

> You can set `OPENAI_API_HOST` where access to the official OpenAI host is restricted or unavailable, allowing users to configure an alternative host for their specific needs.
> Additionally, if you have multiple OpenAI Organizations, you can set `OPENAI_ORGANIZATION` to specify one.
**4. Run App**

```bash
npm run dev
```

**5. Use It**

You should be able to start chatting.

## Configuration

When deploying the application, the following environment variables can be set:

| Environment Variable | Default value | Description |
| --------------------------------- | ------------------------------ | ----------------------------------------------------------------------------------------------------------------------------------------- |
| OPENAI_API_KEY | | The default API key used for authentication with OpenAI |
| OPENAI_API_HOST | `https://api.openai.com` | The base url, for Azure use `https://<endpoint>.openai.azure.com` |
| OPENAI_API_TYPE | `openai` | The API type, options are `openai` or `azure` |
| OPENAI_API_VERSION | `2023-03-15-preview` | Only applicable for Azure OpenAI |
| AZURE_DEPLOYMENT_ID | | Needed when Azure OpenAI, Ref [Azure OpenAI API](https://learn.microsoft.com/zh-cn/azure/cognitive-services/openai/reference#completions) |
| OPENAI_ORGANIZATION | | Your OpenAI organization ID |
| DEFAULT_MODEL | `gpt-3.5-turbo` | The default model to use on new conversations, for Azure use `gpt-35-turbo` |
| NEXT_PUBLIC_DEFAULT_SYSTEM_PROMPT | [see here](utils/app/const.ts) | The default system prompt to use on new conversations |
| NEXT_PUBLIC_DEFAULT_TEMPERATURE | 1 | The default temperature to use on new conversations |
| GOOGLE_API_KEY | | See [Custom Search JSON API documentation][GCSE] |
| GOOGLE_CSE_ID | | See [Custom Search JSON API documentation][GCSE] |

If you do not provide an OpenAI API key with `OPENAI_API_KEY`, users will have to provide their own key.

If you don't have an OpenAI API key, you can get one [here](https://platform.openai.com/account/api-keys).

## Contact

If you have any questions, feel free to reach out to Mckay on [Twitter](https://twitter.com/mckaywrigley).

[GCSE]: https://developers.google.com/custom-search/v1/overview
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