it'd be a string already

maxplanck-ie · Dec 11, 2024 · dd53a7c · dd53a7c
1 parent b7cd34f
commit dd53a7c
Showing 1 changed file with 1 addition and 3 deletions.
diff --git a/src/dissectBCL/fakeNews.py b/src/dissectBCL/fakeNews.py
@@ -441,9 +441,7 @@ def gatherFinalMetrics(outLane, flowcell):
 
         # samples with 0 reads still make an empty report.
         # hence the try / except.
-        parkourOrg = str(
-            ssdf[ssdf["Sample_ID"] == sampleID]['Organism'].values[0][1]
-        )
+        parkourOrg = ssdf[ssdf["Sample_ID"] == sampleID]['Organism'].values[0][1]
         try:
             screenDF = pd.read_csv(
                 screen, sep='\t', header=None