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Workflow comparison

Collins Kigen edited this page Dec 17, 2021 · 4 revisions
Criteria nf-core/ampliseq TADA MBBU Accreditation Qiime MBBU Accreditation dada2
Runtime 21 minutes 46 minutes # #
Setup Easy, 1 command Easy, 1 command Hard, edit configs Hard
Functionality # # #
Last updated 2 months 3 months 8 months 8 months
Documentation Well documented Well documented Lack setup instructions Not well documented
Gaps None Test data, Functional analysis, visualization Test config, functional analysis Not automated
Seq 16S, 18S, ITS 16S, ITS 16S 16S
Recommendation # # #
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