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@mlin mlin released this 13 Mar 07:32
  • spvcf encode: perform QC squeezing by default (opt-out)
  • rewrite header e.g. ##fileformat=VCF4.2 to ##fileformat=spVCFvx.y.z-gabcdef;VCF4.2 and back
  • error message if input stream needs decompression
  • warning message if input stream doesn't start with expected ##fileformat
  • htslib 1.9