Merge pull request #79 from monarch-initiative/el-ncit-mappings

Expand CDA to NCIT Mappings for 12 tissues & Enhance OpUberonMapper

.gitignore

@@ -168,14 +168,38 @@ cython_debug/
 .vscode/
 .idea/
 c2p_env/
-notebooks/Untitled.ipynb
 
 *.pkl
 *.tsv
 !src/oncoexporter/ncit_mapping_files/*.tsv
 !src/oncoexporter/ncit_mapping_files/*.csv
 
-.DS_Store
-src/phenopackets
 *.tar.gz
-/phenopackets/
+
+
+# Mac General
+.DS_Store
+.AppleDouble
+.LSOverride
+
+# Icon must end with two \r
+Icon
+
+# Thumbnails
+._*
+
+# Files that might appear in the root of a volume
+.DocumentRevisions-V100
+.fseventsd
+.Spotlight-V100
+.TemporaryItems
+.Trashes
+.VolumeIcon.icns
+.com.apple.timemachine.donotpresent
+
+# Directories potentially created on remote AFP share
+.AppleDB
+.AppleDesktop
+Network Trash Folder
+Temporary Items
+.apdisk

MANIFEST.in

@@ -1,2 +1,3 @@
 # Include the TSV mapping files.
 include src/oncoexporter/ncit_mapping_files/*.tsv
+include src/oncoexporter/ncit_mapping_files/cda_to_ncit_tissue_wise_mappings/*.csv