Integrative analysis of single-cell multi-omics data using deep learning

Updates:

1. 8/4/2022: Tutorial on Saturn Cloud (video)
2. 6/302021: Decode Life Workshop deep learning lecture (video)

The accompanying notebooks for my blog post "Integrative analysis of single-cell multi-omics data using deep learning: https://medium.com/@yuan_tian/integrative-analysis-of-single-cell-multi-omics-data-using-deep-learning-66a61a3448c5

To run the preprocessing script, you will need to have R and the Seurat package installed by typing:
install.packages('Seurat')
library(Seurat)

To run the autoencoder notebooks, please install Pytorch following the instructions on: https://pytorch.org/